Microarray Probes on PGSC0003DMT400019607
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_37262_PI426222305 |
JHI_St_60k_v1 |
CAAGCTCTTGATCTTTATGATGTTTTAGACTGCAAATCTATTGCTGCTCACATCAAGAAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400019607
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400019607 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G16120.1 |
+3 |
3e-46 |
155 |
72/92 (78%) |
Dynein light chain type 1 family protein | chr3:5465035-5465395 FORWARD LENGTH=93 |
Transcript Sequence (1055 bp)
>PGSC0003DMT400019607 1055 pgsc_dm_v3.4
GTAAAATACTACATAAGACTCAAATTATCATGTAGGATATCACAAAACATGTGTCACATC
TATTAGTTCAATTTTAAACAAGTTTAAATACCAGACATATTTATATATTAGTATGTCATT
TGGATGGATTTAAAAACTTGCACTCAAAAAGAGATTGGGCAGAGCAATTTCTATATAGTC
ACTCTTTGGAAAGAGCCAAAAAGAAGAAAAAGAAAGTGCAGGGAGCTTCTTTAATTTTTT
TTCTTGATCTTCATCTTCATCTTCATCTTCATCTTCTTCTTAATTCATAGCAAAACAGTA
TGTTAGAAGGCAAAGCACTGATTGAAGACACAGACATGCCAGTAAAGATGCAGATCCAAG
CTATGTCATATGCTTCTCAAGCTCTTGATCTTTATGATGTTTTAGACTGCAAATCTATTG
CTGCTCACATCAAGAAGGAATTTGACAAGAAGTATGGAGGTGGATGGCAATGTGTGGTGG
GATCAAACTTTGGGTGTTTCTTTACTCATACTAAAGGAACATTTATCTTTTTCACTTTAG
AGACTCTAAACTTCCTAATCTTCAAAGGAGCCTCTTCTCCTTGACAAGATATTATAGGCC
GTTGTGGTCTGGCCCTTTCCTTGAGCTATAGCAGGAGCTTTAGTGCACCGTGCTGTAGTT
ACTCTTAGTTAAGTCATTCCTATTGTTCATATCTCCTTCCCCCTTTTTAAACATTTTTTT
TCTACTTTTGAAAGCAAGATCTGGCCATTGTATGTTTTCAAAGAAAATGTAACTTTTGGT
TATGTATCCATGAGTAGATTAAATTTAATTATGCTCACTCACTTTACTTATCAAGAAGAT
TATGATGCCTTTGAGAAAGACACTTTCTGGGTTTGCCTTAATTAAGGACCAGATTTAAAG
GAAAAGGAGTGTTGAAGTAGCTTTGTCACAAAGTTGAATTTGCCATTTTAGAATCTCTTT
GCATATATTCCATAGTCAATCATAAGCTTTGTAGGCCATGTCTATACTAGAGGTGGTCAC
TATGTCTAGGACTTTTCAGCTTGTTTGGATGGTTG
