Microarray Probes on PGSC0003DMT400018498
Probe ID | Chip | Probe Sequence |
---|
CUST_46151_PI426222305 |
JHI_St_60k_v1 |
GAATGGGCCCAAATTTATGGGCCAATTTTTTCTTTTTACCTTGGGTCACAACTAAACGTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400018498
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400018498 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT2G40890.1 |
+2 |
3e-120 |
360 |
169/290 (58%) |
cytochrome P450, family 98, subfamily A, polypeptide 3 | chr2:17058291-17060532 REVERSE LENGTH=508 |
Transcript Sequence (1047 bp)
>PGSC0003DMT400018498 1047 pgsc_dm_v3.4
CAAACACAATTATATTAATTTATTTCCCATAATGGCTTTTCCTTTAGTACTCTCTCTATC
AGTATTTATCATCTTTTTATGTTACAAACTCTACAACCGGCTCACGGCCAAGCTGCCTCC
GGGTCCTTGGCCGTGGCCGGTGATTGGAAACCTCTTCAGCATAACGCCGATGAGGTTCCG
ATGCTTTGCTGAATGGGCCCAAATTTATGGGCCAATTTTTTCTTTTTACCTTGGGTCACA
ACTAAACGTGGTGGTGAATAATGCGGAACTTGCAAAAGAAGTTCTTAAAGATAATGATCA
AAATTTGGCCAATAGGTTTAGAACAAAACCTCTTGATAGTGTGAGTAAAAATGGGATGGA
TTTGATATGGGCTGATTATGGACCTCATTATGTGAAAGTAAGAAAGCTTTGTAATCTTGA
ACTTTTTACTCAAAAGAGACTTGAAGCTCTTAGGCCAATTAGAGAAGTTGAAGTTACTGC
CATGGTTGAAAATATTTTCAAGGACACCACTAAGCCTGGTAATGATAGTAAAACAATGAC
GCTAAGGGGCTACTTGGGATTAGTGTCATTCAACAACATAACAAGGCTTACATTTGGGAA
GAGATTTATAAACTCAAAAGGTGAAGTTGATGAACAAGGTGAAGAGCTCAGAGCCATTTT
AACAGATGGGATAAGAATTTCAGGAAAACCTAATTTGGGAGAATTTGTACCATGGCTACG
TTGGGTATTTAAAGATGACAATGAAGCTCTTGAGTCACAAGATAGACGTTTGAATAAATT
TACAAGACTTATAATGGAAGAACACACAATTGCTAGAGAAAAATCTGGAGAAACCAAACA
TCATTTTGTTGATGCTTTGCTTACCCTTCAAAAGGAGTATGATCTTAGCGATGACTCTAT
TATTAGCCTTTTTTGGGTAAGTATACATATACTAGTTAATATAATTTTAACTTTTATACA
CTGACATCACGATTTTTATTTTTGTATTGTTTTTATTTTGAAGTACTAGAGAAATTTCGA
AATGCATGTCTGCAATGTTTATTTTAG