Microarray Probes on PGSC0003DMT400018016
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_13774_PI426222305 |
JHI_St_60k_v1 |
CCTCCAGTCTTTTATCCTACAGTAATGTTCAATAAAGGTTTTGATTGAAACTACATGTCC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400018016
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400018016 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G07490.1 |
+3 |
2e-69 |
218 |
119/149 (80%) |
ARF-GAP domain 11 | chr3:2391189-2391650 FORWARD LENGTH=153 |
Transcript Sequence (1128 bp)
>PGSC0003DMT400018016 1128 pgsc_dm_v3.4
GTGTTGCACACTCAACAGAATGCCACTGCCAACCATTTTGTTGAGAATTTTCTGTCTAAG
ACACCTCTTTGACACAATTCTTCTCTCCTTTGTGTCCAAAAAGTTCAGGCCATCTAATCT
TCTCCCAAAAATTACAATCAGTGGCATGAAAATCAATAACTGTATCGTTGTTTAACCACA
GAATAATGGAGACAGATGAGCTCAAGCGTGTCTTTCATATGTTCGACAGGAATGGTGATG
GAAGGATCACGAAAAAGGAGCTGAATGACTCGTTAGAGAACATGGGGATCTTCATGACTG
ATTCAGATCTGGTGCAGATGATCAACAAGATTGACGTGAATGGCGATGGATACATCGATA
TTGATGAATTTGGTGCTCTATATGAGACCATAATGGAAGAGCGAGATGAGGAGGAAGATA
TTAGAGAGGCCTTCAATGTGTTCGACCAAAATGGGGACGGCTACATTACCGTGGATGAAT
TAAAATCTGTCTTGGCATCGCTTGGTCTCAAGCAAGGGCGGACCGTTGATGACTGCAAGC
GGATGATTAAGAAAGTGGATGCTGATGGAGATGGAATGGTGAATTTTATAGAGTTTAAGC
AGATGATGAAAAGTGGTGGATTTGCTGCATTGAGTTAACAAGAAAATCGACAAGACCTTG
GAGGTTGGAATTGTGTAACCTTTAAGCAAAGGTCTGAGGACAGTTCTTAGAGAAGTTTCT
GGGATGGAGCCTTTACCACCTTAATAAGCCAACTTGATGCTAATGTTAATTAGTCAATCA
AGTGAACTTGGAATACTAGATGCAAAATCAGAAAATGAAAAATAGAGAGAAAAAAACACT
CATTTTCCGCACCGTTATGTTTGTTTGAATAGAAAGAAAGAACACAGATAAAAAGGAGTT
TTCCTGCTCTTTTCGTAGGTTTACGACTTGTAAATAGTTTGTTATATTTTCTAATTCTTT
ATTTCATGTTCTTTGGCTCCTCCCCTAAAGAATCTTGATAGAAAAGCATTACTCCCTCAT
TTTCATGTTATTAATCTTTGTGTACACATTTGTGCGGGATAGAATTACCTCCAGTCTTTT
ATCCTACAGTAATGTTCAATAAAGGTTTTGATTGAAACTACATGTCCT
