Microarray Probes on PGSC0003DMT400017087
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_51694_PI426222305 |
JHI_St_60k_v1 |
GAGTTGGTAAAATCTGTTCCTCTAGCAATTGATGACAAGCACTGAGCAATGATGGTGCAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400017087
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400017087 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G02280.1 |
+1 |
0.0 |
1318 |
634/809 (78%) |
sucrose synthase 3 | chr4:995166-998719 FORWARD LENGTH=809 |
Transcript Sequence (2915 bp)
>PGSC0003DMT400017087 2915 pgsc_dm_v3.4
TAAAGAATAAGAATTATTTTAGATATAAGATATAGTATAAGAAACCTCCTGATCTTCTAC
AAGGTCTCCTCCTCATTGTATTTCATATCAATGTCGAATCCAAAGTTCACAAGAGTACCT
AGTATGAGAGAGAGAGTTGAGGATACTCTATCTGCTCACCGTAATCAGCTAGTGGCTCTC
CTGTCGAGATATGTGGCGCAGGGGAAGGGGATATTGCAACCTCATCACTTAATTGATGAG
TTCAATAGTGCTGTATGTGATGACACTGCTTGTGAAAAGCTCAAAGAAGGCCCCTTTTGT
GAAATCTTGAAATCTACTCAGGAAGCCATTGTGCTCCCACCATTTGTTGCTATAGCAGTT
CGTCCAAGGCCAGGTGTTTGGGAATATGTTCGTGTTAACGTATATGATCTGAGTGTTGAA
CAATTGACTATTCCTGAATATCTCCGTTTCAAAGAAGAACTTGTGGATGGAGAGGATAAT
AATCTCTTTGTGCTTGAGCTGGATTTTGAGCCATTTAATGCATCAGTTCCTCGTCCATCA
CGCTCTTCATCCATTGGAAATGGAGTCCAATTCCTCAATCGTCATTTGTCCTCAAATATG
TTTCGCAGCAAAGAATCTCTCGACCCGTTACTTGATTTCCTTAGAGGACACAATCATAAA
GGGAATGTCTTGATGTTGAATGAACGTATACAGCGAATCTCCAGGCTGGAGTCGTCTCTT
AATAAAGCAGATGATTATCTCTCAAAGCTACCACCAGATACACCCTATACTGAGTTTGAA
TATGCATTGCAAGAAATGGGCTTTGAGAAAGGTTGGGGTGATACTGCAAAACGTGTTTTG
GAGACTATGCATCTGCTTTCTGACATTCTTCAGGCTCCTGATCCCTCAACCTTGGAGACT
TTTCTTGGTAGATTACCAATGGTGTTCAATGTTGTCATATTATCTCCTCATGGATACTTT
GGTCAAGCAAATGTCTTGGGTTTGCCGGACACTGGTGGACAGGTTGTCTATATACTGGAT
CAAGTGCGTGCTTTGGAGGCCGAAATGCTCCTTAGAATAAAGCAACAAGGACTCAACTTC
AAGCCTAGAATCCTTGTTGTCACCCGACTGATACCTGATGCTAAAGGAACCACGTGCAAC
CAGCGGTTGGAGAGAATTAGTGGAACTGAATACTCACATATTTTACGTGTCCCTTTTAGG
ACAGAAAATGGAATCCTTCATAAATGGATATCTAGGTTTGATGTATGGCCTTACCTGGAG
AAGTTTACTGAGGACGTGGCAGGTGAAATGTCTGCTGAGCTCCAGGGAGTACCCGATCTG
ATTATTGGCAACTACAGTGATGGAAATTTAGTTGCCTCCCTGTTAGCATATAAAATGGGC
ATCACACAGTGTACCATTGCTCATGCTTTGGAGAAAACAAAGTATCCTGATTCTGACATC
TATTGGAAAAAGTTTGAGGAGAAATATCATTTTTCATGTCAGTTTACTGCTGATCTACTG
TCAATGAATCATTCAGATTTCATAATCACTAGTACCTATCAAGAGATTGCAGGAACGAAG
AATACTGTTGGTCAGTACGAGAGTCATACTGCTTTCACTCTCCCAGGCCTATATCGTGTT
GTCCATGGCATTGATGTTTTCGATCCCAAATTCAATATAGTGTCTCCTGGAGCTGACATG
ACAATTTACTTCCCATATTCTGACAAGGAAAAGAGACTGACATCTTTGCATCCCTCGATT
GAGAAGTTGTTATTTGATCCCGAGCAGAATGAAGTGCATATAGGCAACCTGAATGATCAA
TCAAAACCGATAATTTTTTCAATGGCAAGGCTTGACCGGGTCAAGAACATTACGGGATTA
GTTGAGTGCTATGCTAAAAATGCCACACTCAGGAAATTGGCTAACCTTGTTGTAGTAGCT
GGATACAACGATGTAAAGAAATCCAATGATAGAGAAGAAATAGCAGAAATTGAGAAGATG
CATGCTCTTATGAAGGAACATAGCTTGGATGGTCAATTCAGATGGATATCAGCCCAAATG
AACCGGGCACGTAATGGTGAGCTCTATCGCTATATAGCTGACAAGAGAGGTATATTTGTT
CAGCCTGCGTTTTATGAAGCGTTTGGACTCACGGTGGTTGAAGCTATGACTTGTGGTCTT
CCAACATTTGCAACTTGTCATGGTGGTCCTATGGAGATCATTCAGGACGGTGTATCCGGG
TACCATATAGATCCTTATCATCCCAATAAAGCTGCTGAGCTCATGGTAGAATTCTTCCAA
CGATGCGAACAAAATCCTACTCACTGGGAAAATATATCTGCATCTGGCCTACAGAGGATT
CTCGACAGGTATACATGGAAAATTTACTCGGAGAGGCTGATGACTTTGGCTGGTGTATAT
GGTTTCTGGAAGCTTGTTTCAAAACTCGAGAGGCGTGAAACTAGACGATACCTCGAGATG
TTTTACATTCTCAAGTTCCGCGAGTTGGTAAAATCTGTTCCTCTAGCAATTGATGACAAG
CACTGAGCAATGATGGTGCAAGCATTGGAGGATTTTGCAAAGAAATAATATCGTGGATCG
AGAAGAGCAGCTAGTAAAATAAAGACATAAATGTTATGTAAAAAAAAGCAATGTGCTGCC
CCAGTGGGGGTGGCTGATATGCACTCTATGATCATGTTTTTTATCTTCTTGTTGTAGTTA
AACTAATGTGCACTCAGTTTTTTCTTGGTTAAAAAGTTGTTTTATTAGGAAATACCACAT
ATTTTGCTCTCTTCAGATCGGTGTCGTCTTCAAACCTTGCTTATGGGATCAAACTGGGTA
TATTGTTGTGTCAAGTTGTTACGTAATTTGCTCCTAGAGGATTGGCATAGATCATCAATA
TTCACTTAGAGGTCGTTTGGTAGAGTGTATTAGGA
