Microarray Probes on PGSC0003DMT400016514
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_44014_PI426222305 |
JHI_St_60k_v1 |
CCTGTGGTTTGATATTGCACTAGGACCAAAAATGTATCCTTACAAAGTTGTATACAGAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400016514
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400016514 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G43850.1 |
+3 |
7e-110 |
320 |
143/183 (78%) |
RmlC-like cupins superfamily protein | chr5:17627364-17629122 REVERSE LENGTH=187 |
Transcript Sequence (931 bp)
>PGSC0003DMT400016514 931 pgsc_dm_v3.4
TATTGATTAATTGATTTGTTTTATAAGTTTAGGCATGGTTTATGGATGAAAATTCAGAAG
ATCAGCGGCTACCGCACCAGAAGAACCCACCGGAGTTTGTTTCAGTGGAGAAATTAGCAG
AACTCGGAGTTTTATACTGGAAATTGAACCCTAATGATTACGAGAACGATGAAGAATTGA
AAAAAATTCGTGAAAGTAGAGGCTACAGCTACATGGACTTGCTGGATTTATGCCCTGAGA
AAGTTGATAACTATGAGCAGAAGTTGAAAAATTTCTACACGGAGCACATACACGCAGATG
AGGAGATACGTTACTGTCTGGAAGGGAGTGGATATTTTGATGTGAGAGACAAGGATGATC
GCTGGATTCGCATCTGGATGAAGGCCGGTGATATGATCGTCCTGCCTGCTGGGATTTACC
ACCGGTTCACCCTAGATACTGATAACTATGTCAAGTTGATGAGGTTGTTTGTGGGAGAGC
CGGTGTGGACGCCTTACAATCGACCACAAGAAGATCATCCAGCAAGGAAGGAGTACATCA
AGAGTGTTACTGAAAGAGTTGGAGTGCCTCTTGCAGCACACTAAGACATATTTGAGCTCT
GCAAACCTGAGAGTGAGGCAAATTATTAAAACTTGGGAATAAGTTTTGCTGCATATTAAT
TGTTGTATGTTTGTATAGAATATCTTCTATATATCTGGAGACAATGTAATAATCAATATT
AATCTAATCTGATGAAGATATATCTGGATTTGGCCTATGGTCCCTAGTTAGTGAATTTAT
GCTGTGTTTAGATATTATGTCAATGACCTGTGGTTTGATATTGCACTAGGACCAAAAATG
TATCCTTACAAAGTTGTATACAGAAAACAAATACTATGTTTTTAAAAAAAAATATATATT
TGAGTTATGGCTATGAAAAATGAAGTTCCTA
