Microarray Probes on PGSC0003DMT400016178
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_36342_PI426222305 |
JHI_St_60k_v1 |
GGCATACAATTACATATATCTAATGCTTCCGCTTTGGCCTTCTTCAGTTTTTATTGCAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400016178
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400016178 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G44380.1 |
+1 |
1e-31 |
121 |
69/170 (41%) |
Cysteine/Histidine-rich C1 domain family protein | chr2:18323590-18324333 REVERSE LENGTH=247 |
Transcript Sequence (1054 bp)
>PGSC0003DMT400016178 1054 pgsc_dm_v3.4
CAGCTACGTAACTCTCCAATGTATCTCTACTATATTGCACAACAAAATTGCAAGGAAAAA
TAAAACACAATGGGAAGATTGAATGGGGGTACAAATGCGGGTAAGGAACACTTCAGCCAT
GACCACATCTTGAAACTAATTGCCAATCCAACTGAAACTCTCACTTGCAATGCTTGTGAG
CAACCAAACAATACTAACAAGCCTTTCTACGGCTGCAACACCTGCCAATATTTCCTCCAT
GAAAACTGCTTTAATGCTCCGCGTTTTCTCAATCACTCGTCTCATCCTTCCCACCCCTTG
ACCCTTCATCATCCGCCTTACGCGGGTGGTTACTATATTTGCAATGCTTGTGGGTCTGAT
GGAAATGGATTTTGCTATAACTGTGCTGCTTGTGATTTTGATATTCACTTGCAATGTGCA
TCATGTCCTAGCTCCATACTTGTTGATAAGCACACGCATCAATTGGAGCTCCACTTCGGT
TCTCCTGACGAAGACAAGGATAGCAAATATGTTTGCGATATCTGCTTTGTAACGATGAGC
AATGACAATTGGTTGTACTATTGCGCTGGCTGTGATTTTGCGTCACACTTGTACTGTGCG
ATAACTAGTCCTGAAGTCGGTGTTTTCCCCAAACAGCAACATCCAAATCCAAATCCAAAT
CCAAATCCAAATCCAAGTCAGAATTCGAATTCAAATTCAAATTTAAATCCAAATGCGGCG
GTGGAAATGATAAATTCAGTGAATGATGATCATGACCGGCTTATAGCAGCTCAAATTCGC
GCTCAGATAGCGGCACGAGGAAGACGGGCTGCTCTGGACTTAATCTAGGCATACAATTAC
ATATATCTAATGCTTCCGCTTTGGCCTTCTTCAGTTTTTATTGCAAAATAAATGCTTTAT
TGTTGTTATCATGTTATTTCTCTTTCAGATTTGTATCTTTATTCATCAAGTTTCTCCATT
TTTGTTTTGGTTGCTATGTTATCTATTATAAACTAGTGTTTGATTTTTCCCTTTTTTGTT
CTGTTTTCTTGGGTCCAAAATTAATGCCTTTGGC
