Microarray Probes on PGSC0003DMT400015593
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_41763_PI426222305 |
JHI_St_60k_v1 |
CTAGTAGTTGTGGAAAATCCAATTTCAAATAAGAGGATGTTTAAGGTTGGTCAAGTGGAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400015593
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400015593 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G23770.1 |
+2 |
5e-79 |
267 |
203/596 (34%) |
protein kinase family protein / peptidoglycan-binding LysM domain-containing protein | chr2:10120242-10122080 REVERSE LENGTH=612 |
Transcript Sequence (2173 bp)
>PGSC0003DMT400015593 2173 pgsc_dm_v3.4
CACACACATCTCTCCTTCAACCAAAACCAAGAAAATGATAACAAGACCAATATTTGTTTT
TTCACTTCTCTTATTCTTATCATTCATATTCAACCAAAACATAATATGTTATGCACAAGA
GCCACCAAGCATCACAGGATATACTTGTAATCCTAACCAATTCAATCCATGTCAAACTTA
TGTGTTATACAGAGCTAGAGGACCAGACTTTCTTGATTTAGCCTCAATTGGTGATCTTTT
TTCAGTAAGTAGACTAATGATAGCAAACCCTAGTAATATTTCCAACCCAAACACAACTCT
TGTTAATGATCAACCCCTTTTTATCCCCATCACATGTTCTTGTAACAACATCAACACAAC
ATATGGTAGCATATCTTATGCTGGCTTTAACTACACTTTCAAATCAGGTGACACTATGTA
TGGTATATCAACATCTAAATACCAAAATCTTACTACTTATCAATCTGTTGAGGCTGTTAA
TCCCACAGTTGTAGCAACCAACATTGATGTAGGCCAGACCATAAAATTCCCAATTTTTTG
CAAGTGTCCAAACACGACACAAAATCAACCAAGACTACTCATAAGTTATGTTTTTCAACC
TAATGATAACATTTCTTCTGTCGCCTCAAGATTCAGGGTAACCCCACAATCTATAACACA
AATTAATGGAAATAACACCAAGATTCTTGATACCCTTTTCATCCCTCTTTCTAATCTACC
TAATCTTACACAGCCAGCATCTTCAAACACCCCACCCCCACCCCCAGCACCAGCACCAGT
AATTCAAGAAAATGACAGAAAAGAGACTGTCATAGGGTTAGCAATTGGTTTAGGGGTTTG
TGGGTTGCTGTTGATTTTGATTCTTGGTTTGTTTTACAAGGAGAAAACAGTAAAGAAAGA
AAAGTATGGTGATGTAGAAAGGCAAAAAAGTTTGTATCTTGGATCAAAAAAGAAGTCTTT
TGTTGATAAAGATGTTGAAGTGAATTTGTTGGCTGATTTATCAGAGTGTTTGGATAAGTA
TAAAATGTATAAAATGGTACAACTTTGGGAAGCAACAAATGGATTTGATGAAGGGTGTTT
GATTCAAGGGTCTGTGTTTAAAGGAACAATTGATGAAGAAGTGTTTGCAATCAAAAAAAT
GAAATGGAATGCCCGCGAAGAACTCAAAATCCTGCAAAAGGTGAACCATGGGAATTTGGT
GAAGCTAGAAGGTTTTTGCATAGACCCTAAAGAAGCAAATTGCTTCTTAGTCTATGAGTA
TGTTGAAAATGGTTCACTACATTCATGGATTCATGGTGAAAAACCTGAAAAATTGAGTTG
GAAAACAAGACTAAGAATTGCAACTGATGTTGCAAATGGTCTTTTATACATTCATGAACA
TACAAGGCCAAGAGTTGTCCACAAAGACATCAAAACTAGCAACATTCTCCTAGACACCAA
CATGAGAGCCAAAGTTGCCAATTTTGGTCTAGCTAAATCAGGTTGCAATGCCATAACAAT
GCACATTGTAGGTACTCAGGGGTACATCTCCCCTGAGTACCTAACCGATGGCATTGTATC
CACTAAGATGGATGTTTTCTCATTTGGAGTTGTGTTGCTCGAGCTAGTGTCAGGGAAGGA
GGCTATTGATGATGAAGGGAAAGTCTTGTGGGCAAAAATTAGCGATTTTTCGGAAGGGAG
TGAAGAGAGGAAGGTGAGGAAATTGCAAGAATGGATGGATGATAGTCTTTTGAGGGAAGA
GTTAACAATGGAGAGTGTTGTGAATGTGATGTCTGTGGCTATTTCTTGTTTGAATAAAGA
TCCATCAAGAAGGCCAGGGATGATTGAAATTGTGTATGCATTGTCTAAAAGTATTGATCT
ATTTACTGATGTCTCAGAGGAAGGACTATCTCCAAGGCAAGTCACAGCAAGATAGGGGAC
ATATATCTATTTAGCATATTATGTAAAAGTAGTTTTGAAGTGAGTAGTATTATTGTGTTT
TGAGGTTTTTACTTTACTTTAAAGTTTGCTTCTATATATGTGTAATATTACTCCTATATT
ATCTTTTCTAGTAGTTGTGGAAAATCCAATTTCAAATAAGAGGATGTTTAAGGTTGGTCA
AGTGGAATATATATTATGTTGTAATGAGTGTTTTTATGTTATGTTGCTCGGATTCTTTAA
AATTGTATTACTT
