Microarray Probes on PGSC0003DMT400015017
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_25220_PI426222305 |
JHI_St_60k_v1 |
GGTCTCTATTTGGATCAAACAATAACATGAATACGACTTCTCATCTACCCGTCAATCAAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400015017
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400015017 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G46760.1 |
+1 |
1e-74 |
248 |
179/552 (32%) |
Basic helix-loop-helix (bHLH) DNA-binding family protein | chr5:18974231-18976009 FORWARD LENGTH=592 |
Transcript Sequence (1371 bp)
>PGSC0003DMT400015017 1371 pgsc_dm_v3.4
ATGGAAAATATAATTTCTACTTCATCAACTCCTTCACAACCAAACACACTTCAAAAAATC
CTTCAATATATAATCCACAATCGTCAAGAATGGTGGGTTTATGCCATCTTCTGGCAAGCA
TCCAAGGATGTTAATAACCGTCTCATTTTATCGTGGGGCGATGGCCATTTTCGCGGAACT
AAAGATACAATAGGTTCCGCGAAAATAGGTTACGACCAATATCATCAGCTTCAGAAGAAA
TTTGGTTTCAATGGTATTAATGATACTAATAATAACGTTACGGATACAGAGTGGTTTTAT
ATGGTATCTATGCCACAATGTTTCGTGGCCGAGGATGAACTCGTTCTACGAGCTTACACC
TCGGCCTCGCACGTGTGGCTAGCTAGTTATTATGAATTGCAACTTTATAATTGTGAGAGA
GCTAAAGAAGCTAATTTACATGGAATACGTACGATTGTGTGTATTTCTACAACTAGTGGT
GTTGTTGAATTGGGTTCCTCTGATATTATTCAAGAAAATTGGGAATTTGTTCAATTCATT
AGGTCTCTATTTGGATCAAACAATAACATGAATACGACTTCTCATCTACCCGTCAATCAA
GTAACATTAGGAGATCATCATAAGGTTGCAAAATGTGGATCACCCCAACAAGAAGAAGAT
ATAATAGTAAAGCAAGAAGTGGCTATCGGAAATCTATTATCTGAATCGGGTAATTCTGAT
TTCGAAAACGATGACTCTTCAACCATCAACAACATTGTCAATCGATCAATTAAACGAGCA
AAGAAGGGTGATTCGAGCAATATAACACGAGAAATGGCTATGGATGTTCACGTAGAGGCC
GAGAGAAAAAGAAGGGAAAAGTTAAACCATAGATTCTACGCTCTACGGAGCGTAGTCCCA
TACGTGTCCAAAATGGACAAAGCTTCATTGCTAGGTGATGCAGTTACTTATATCAATGAA
CTTAAAGCTAAAATAAAAAACTTAGAATCCAAATTAATCGAACCTCAGAAAAAACATATA
CTTATGGAACAACACGATTCTCATAGTGCGTCCTCCACTATTGTAACTGAACATGGGGCA
AACAATAAGTCATTATTTTCCAGCAACGGGGCACGAAATGGGATGGAAATTGAAGTGAAA
ATTATTGGATCTGAAGGTGTGATTCGGGTTCAATCTTTGGATATGAATTATCCATGTACG
AGATTGATGAACGCGATGAAAGAACTGAAATTTCAGATTTACCATGCAAGTATTTCCAGT
GTTAAAGATTTGATGCTTCAAGATATCGTGATTAGGGTTCCTGAAGAGTTTTTGAATGAG
GAAATGTTGAAATCTGCTATCATCTCAAAATTAAGTGTTATTGAGAATTAA
