Microarray Probes on PGSC0003DMT400014217
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_37535_PI426222305 |
JHI_St_60k_v1 |
GTCATCTGAGTGCCGTTCATATCGAGATTCTAGATACTTTTGTTCTTCTTGTGAAAATTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400014217
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400014217 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G52640.1 |
+1 |
0.0 |
409 |
242/275 (88%) |
heat shock protein 90.1 | chr5:21352542-21355147 FORWARD LENGTH=705 |
Transcript Sequence (2635 bp)
>PGSC0003DMT400014217 2635 pgsc_dm_v3.4
AATTTTTGTGTGCTAATTTGTTGTATATCTGGCTTAATTTGCACATTTGGGTGTAAGAAG
AGTGGTCTTATTTCATTATATGAATGATTTTCTTTTAACACATTTTCTCTCTAGTTCCTC
AAGGCCCAAGTCTATATTCGAGAATGAGAGAGGGAGAGATGGTGATTGAGAAAAACAAGT
GGATAGGAGAGCTTGGCTAGGGTTGTATTACCACAGCTTCACAAGCTCCTAAATCGAGGT
CTAGGGTCAGGCTAGAGGTCGGGCCTCAAATCCCGAGTCAGGGTCGGGATCATGTCTTGT
GTTCTGTGTAGGATGTCAAGTCTTACATCAAAAATCGCAACTCACAAGTCTTCTTTCTGA
ATTTACGATCAACATCTTATTCATTTTCACTCGATCGGCCTTTTTTTGGTTTTGTTGAGC
TTTGAGCATCAATGGCGGATGTGCAGATGGCTGAGGCAGAGACATTTGCTTTCCAGGCTG
AGATTAACCAGTTGTTGAGTTTGATCATCAATACATTCTACAGTAACAAGGAGATTTTCC
TTCGTGAACTCATTAGAAATTCTTCTGATGCATTAGATAAGATCCGGTTCGAGAGCTTGA
TGGACAAGAGTAAACTCGATGCAGCCTGAACTCTTCATTCGCCTTGTTCCTGACAAGGTG
AATAAAACTCTCTCCATCATTGATAGTGGTGTCGGCATGACTAAAGCAGATCTGGTTAAC
AATCTGGGTACAATTGTGAGGTCCGGCACAAAGGAGTTTATGGAAGCTCTACAGGCTGGG
GCTGATGTGAGCATGATTGGCCAATTTGGTGTGGGTTTCTACTCTGAGTATCTCGTAGCA
GAGAAGGTTATTGTAACCACCAAGCACAACGATGATGAGCAGCATATCTGGGAATCACAA
GCTGGTGGTTCATTCACTGTTACAAAGGATGTTGATGAGGAGCAATTGGGCAGAGGAACC
AAAATCACTCTCTTCCTCAAGGAGGACCAGTTGGAGTACTTGAAGGAAAGGAGAATCAAA
GACCTTGTGAAGAAGCATTCTGAATTCATTAGCTACCCAATTTACCTCTGGACTGAGAAG
ACAACTGAGAAGGAAATCAGCGATGATGAAGATGATGAATCCAAGAAAGAACAAGAGGGT
GATATTGAGGAAGTGGATGAGGATAAAGAGAAGGAGAAAGGTAAGAAGAAGAAAATCAAG
GAGGTTTCTCATGAGTGGCAGCTCATTAACAAGCAGAAACCTATCTGCTTGCGCAAACCA
GAAGAAATCACAAAGGAGGAATATGCCGCTTTCTACAAGAGCCTGACCAATGATTGGGAG
GAACACCTTGCAGTCAAGCACTTCTCTGTTGAGGGGCAACTTGAATTCAAGGCGATCCTC
TTCATACCTAAGAGGGCTTCATTTGATCTATTTGGCACCCGCAAGAAGATGAACAACATC
AAAACTTTATGTCAGGAGGGTGTTCATCATGGACAACTGTGAGGAACTTATCCCGGAGTA
CCTTGGATTCATGAAGGGTGTTGTTGACTCTGATGATTTGCCCCTCAATATCTCCCGTGA
GATGCTGCAGCAGAACAAGATTCTCAAGGTCATTAGGAAGAACCTCGTGAAGAAATGCAT
TGAGATGTTCAATGAGATTGCAGAGAACAAGGACGACTACAACAAATTCTACGAGGCTTT
CTCAAAGAACTTGAAGTTGGGCATTCATGAAGATAGCCAGAACAGAGCTAAGTTGGCTGA
CCTTCTTCGATACCAGTCAACCAAGAGTGGTGATGACCTGACAAGTTTGAAAGATTATGT
AACCAGGGTGAAGGAGGGGGTCAGAAAGATATCTACTACATCACTGGAGAGAGCAAAAAG
GCAGTCGAAAACTCACCATTCTTGGAACGCCTAAAGAAGAAAGGATATGAAGTACTCTTC
ATGGTTGATGCCATTGATGAATATGCAATTGGGCAACTGAAGGAATATGATGGTAAGAAA
CTAGTTTCTGTTACAAAGGAGGGCCTAAAGCTTGATGACGAGAGTGAAGAAGAAAAAGGA
AGAGAAAACAGTCCTTTGAGAGCCTTTGCAAGGTCATCCTTGGAGACAGAGTTGAGAAGG
TTGTAGTCTCTGATAGGATTGTTGATTCTCCATGTTGCTTAGTGACAGGTGAGTATGGTT
GGACAGCAAACATGGAAAGAATCATGAAAGCTAAAGCTTTGAAGGACAACAGTATGAGCT
CTTACATGTCTAGCAAGAAGACAATGGAAATCAACCCTGATAATGGCATTATGGAGGAGT
TGAGGAAGAGAGCTGAAGTTGACAAGAATGACAAGTCAGTGAAAGATCTTGTGTTGCTGC
TGTTTGAGACAGCTCTGCTGACATCTGGTTTTAGTCTTGATGACCCGAATACTTTTGCTG
CAAGAATTCACAGAATGCTGAAGTTGTGTTTGAGCATTGACGAAGAAGAGGAAGCTGGTG
AGGATGTTGATGATATGCCTCCTCTAGAGGATGTTGGTGAGGAAAGCAAGATGGAAGAAG
TGGACTAAGCACTTTGCGTCATCTGAGTGCCGTTCATATCGAGATTCTAGATACTTTTGT
TCTTCTTGTGAAAATTTTATAAATGGCATATATACGACTAATAATTTCAAGTTAT
