Microarray Probes on PGSC0003DMT400014067
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_44995_PI426222305 |
JHI_St_60k_v1 |
CTGTGGAGAAAGTAAAAGGTTCCTCAGGCCTTAAATTCTTTAACATTATTGTCCAAAAGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400014067
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400014067 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G39830.1 |
+2 |
1e-157 |
460 |
226/323 (70%) |
Cupredoxin superfamily protein | chr4:18479103-18481184 FORWARD LENGTH=582 |
Transcript Sequence (1138 bp)
>PGSC0003DMT400014067 1138 pgsc_dm_v3.4
ATAAATAAGTTTGTTTGTTTTTTATTAATTGAATTTTGTGATGCAGGGGCATAACATGAC
GGTTGTTGAGGCAGATGGTCACTATGTGGAGCCATTTGTGGTAAAAAATCTTTTCATTTA
TTCTGGAGAAACATACTCAGTCCTAATTAAAGCTGATCAGGACCCTACAAGAAATTATTG
GGCTAGTACAAAAATTGTCAGCAGGAATAGTACTACTCCAAATGGTTTGGGTATTTTCAA
TTATTACCCAAATCATCCTAGGAGATATCCTCCTAGTGTACCACCCTCGGGGCCACGTTG
GGATGACGTTGCCCCCAGGATGGCTCAGAGTGTTGCGATCAAGTCCCACAAAGATTTCAT
CCATGCCCCTCCTCTGACATCGGACAGGGTCATTGTCATGCTCAACACACAAAACAGGGT
GAACGGGTATGTACGTTGGTCAGTCAACAATGTCTCGTTCAACATGCCTCATACGCCTTA
CCTGATCGCCCTTAAGCACAACTTATTACATACTTTCGAGCAAACCCCTCCTCCAGACAA
CTATGACCACAAGAATTATGACATCTTCAATATCGCGCCCAATGTGAATGCTACAACTAG
CAACTCAATTTATCGATTGAAGTTTAACACAACAGTGGACATCATATTGCAAAATGCCAA
CACAATGAATCTAAACAACAGTGAGACACATCCTTGGCATTTACATGGACATGACTTTTG
GGTCATGGGCTATGGTAATGGAAAGTTCAACCAATCTATTGACCCAAAGAATTACAACTT
TGTGAACCCAATAATGAAAAACACAATCCCAGTCCATCCTTATGGATGGACCGCATTGCG
ATTTCGGGCCGATAATCCAGGAGTTTGGGCCTTCCATTGCCATATTGAGTCACATTTCTT
CATGGGAATGGGAGTTGTATTTGAAGAAGGAATTGAGAAAGTTGGCAAATTGCCTACTTC
TATCATGGGCTGTGGAGAAAGTAAAAGGTTCCTCAGGCCTTAAATTCTTTAACATTATTG
TCCAAAAGATTACTTTAGTTTGATATTGTTTGGATTCTTTTGATAGTTGCCAAAAATAAA
AAAAAATGTGTTCCTTTTTGTTTTAAAACATCTACACTGTAAAAAAAAACAATACAAT
