Microarray Probes on PGSC0003DMT400013766
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_27233_PI426222305 |
JHI_St_60k_v1 |
ATCTTTGCAAAATCAAGTTGAGTTCCTCTCAATGAAGCTATCTGCAGCTAGCACATATTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400013766
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400013766 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G18400.1 |
+3 |
2e-56 |
187 |
120/257 (47%) |
BR enhanced expression 1 | chr1:6331464-6333576 FORWARD LENGTH=260 |
Transcript Sequence (1108 bp)
>PGSC0003DMT400013766 1108 pgsc_dm_v3.4
CAGACACAACTTCTCTTATCATCAAATACAATTAACATTCAACATATTTTATTTTTTATA
ATATACAAGAAGTTGTCATGGCTTTTCATTATTTCAATCCAGATATGCAAATCATTATTC
CACAATTCTCTCTATTAAACACTGACACAAATTTGAATTTTCATAACCAATTTCCAGAAC
AAAATTACTTGAATACCACTTCCCTGGAAATGTCTAATTTCAATTTTCATAAACATTCTG
ATGAACATATTTTCAACCAAATCCCTGAATTTCCGATAGGTTTAATAGAAAATTTCCAAC
AAGATATGTTCAATCTTTCAGTACCAGCTAGAAATGATATAAATGAAAGCAAGAAAAGGA
AAACAATTGAAACCCCAGAAAGTAGCTCTGCTTACTCATCCCCTGCAGTTTCTTCAAGAA
GAAAAACAAGCAAAGGAAGAGGAAAGAGAGTAAAAAGTGATGATAATGAAGAAGAGAAAC
TAAGGCAAGTGGTGCATGTAAGAGCTAAGAGAGGCCAAGCAACTGATAGTCACAGTTTAG
CAGAAAGGGTTAGAAGAGGAAAAATTAATGAAAGACTTGGGTGTTTACAAGACATTGTTC
CAGGATGCTACAAGTCTATGGGCATGGCAGTAATGCTGGATGAAATAATTAACTATGTGC
AATCTTTGCAAAATCAAGTTGAGTTCCTCTCAATGAAGCTATCTGCAGCTAGCACATATT
ATGACTTCAACTCAGAGACAGACATTTTGGAGACAATGCAGAGAGCAAAGGCATATGAAA
CACACATGATGCAGAAGCTAAAGAAAGAAGGATGTGAAGGGGTGGGTTCTAATCAAGTTG
CCCCTCTAATTGACCACACTTTTGGCTGTTATCCCAAGTTGTCTTACAACACCTAAAGAA
TCATTCAGCAATTTTTCCTTTTCTGATCAATATATTCCTCTTAGTGTTATACATTTGTAA
TTTTTATACACATGAAAAATCGAGAAATTGGACACATATACATGTATCAAGTCTCACAAT
ACAACCAAATAGACACATCTTCTCGGTAAAAGTGTGTATGGGTGATGTTGGATGAATTTA
CACTTTTTTTTGCCTAATTTTACCCAAG
