Microarray Probes on PGSC0003DMT400012612
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_32315_PI426222305 |
JHI_St_60k_v1 |
TCAGAGAGCTCTCTGGAAGAGGACAAGACATTTACATACGAATGGATTCTTCAGACATAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400012612
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400012612 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G27290.1 |
+3 |
0.0 |
847 |
425/789 (54%) |
S-locus lectin protein kinase family protein | chr4:13666281-13669202 FORWARD LENGTH=783 |
Transcript Sequence (2983 bp)
>PGSC0003DMT400012612 2983 pgsc_dm_v3.4
ATTAAAAGGCTTAGGCATCAAACACATAGATGGAATCTAAATACTTCATACTTTTCTTAC
TATCTTTCTACTCTTTTATACCGAAGATTAGTTCTACTACGACAAATGTAATCAATACTA
ATCAGTTCATAACAGATGGTGACACTATTGTTTCATCTGGTGGAACCTTTGAGCTGGGAT
TTTTCAGCCCCAATGGTTCCACAACGCGATATATTGGGATATGGTACAAGCAAATTCTTC
CTTATGTCCAAACAATTGTATGGGTTGCAAACAGAGAGAAACCACTCACCAATACATCTT
CAGTCGTTTTGAAGGTCAACAAGCCGGGAATACTTGCTCTACTTAATGACAAGAATGAAA
CTATATGGTCCACGAACACCTCACGATCAGTCCAAAATCCAGTTGCAGTGCTGTTGGATT
CTGGTAATCTTGTCCTAAAAGATGCAAATGATGACAATCCAGAAAATTTCCTATGGCAGA
GTTTCAATTTTCCAACTGATACTCACTTGCCTGATATGAAACTCGGAAAGAATTTTAAGA
CTGGTATTGAAGTTTACCTTTTAGCATGGAAGAACGATAATGATCCAACTCCAGGGGAAT
ACAGTCTCCACATTGATCCTACTGGATATCCACAAGGCCTCATTAGACATGGGGCAAGGG
TATCAGCTCGAGCAGGACCATGGAATGGTTTACGGTGGAGTGGAGCACCTGCACCACTAC
AAACACAAACCAGCATATATACTTTTCAATTTGTTTTCAATGAAGAGGAGGTTTACTATA
GTTTTTCTCTCATTAACAACTCACTGTTAACAAGGTTAGTCCTGACTAACAATGGTTATA
TACAACGTTTGACGTGGGTGGATAGGACAAAGAGTTGGCATCTTTACCTCAATATTCCTC
TGGATACTTGTGATACATATAGCTTATGTGGTGCATATGGGAGCTGTGTCATAGATAGTT
CTCCTGTTTGTGGATGTTTGGACAAGTTTGAACCTAAATATCCACAAAATTGGCAAACGG
GAGACTGGTCACAAGGGTGTGTTAGGAAGACACCTATTGATTGCAACAAGGAACATGGAT
TTCTAAAATATTCTGGAATCAAGTTGCCAGAAACTAACAACTCTCAGTACAATAAGACCA
TGACACTCGAAGGATGTAGGCAAGTATGCTCAACGAACTGTTCTTGCACAGCTTATTCGA
GCCTAGATATAAGCAATGGAGATAAAGGTTGCTTGTTTTGGTCTGGGGAGTTGATTGATA
TCAGAGAGCTCTCTGGAAGAGGACAAGACATTTACATACGAATGGATTCTTCAGACATAG
TATCTCAGGCAAGTTCAAACAGAAAGAAGACAGGGACAGTACTCGCGGTGAGTTTCTCGT
TGTTGGTGGCAGTGATTCTGCTAGGCCTGATTCTGTTCATGTACATACGTAAAAAGAAGA
AACTAAAACTCAAAGAAGATTTTGAGCTGCCACAGTTTCAATTGTCGTTAATAACAAGAG
CCACAAATAACTTTTCGGTCAACAACCAGATTGGAGAAGGTGGATATGGACCTGTTTATA
AGGGAGTACTGGAAGAGGGACAAGAAATTGCTGTGAAGAGACTGTCAAGGACTTCCATGC
AAGGAATTGATGAATTCAAGAATGAAGTTACCTATATTGCCAAGCTTCAGCATAGAAATC
TTGTGAGACTTCTGGGTTGCTGCATTCAAGGGGAAGAAAAAATGTTGATCTATGAATACA
TGCCTAATAAAAGCCTGGACTCATACATATTTGATCAAACAAAGAAAAAGTTACTTGATT
GGTCAAGGCGTTTCGACATCATTAATGGAATTGCTCGTGGCTTATTGTATCTCCATCAAG
ATTCTAGACTACGTATTATCCATAGAGACCTTAAAGCAAGCAATGTTTTGTTAGATACAG
AAATGAATCCAAAGATATCAGACTTTGGGATGGCTCGAAGTGTTGCAGGAAATGATATGG
GAGCAAAAACATGCCATGTAGTTGGGACACACGGTTACATGTCCCCTGAATATGCAGTAG
ATGGAATCTTCTCAGTAAAATCAGATGTGTTTAGCTTTGGCGTATTGGTGTTAGAGATTG
TGAGTTGCAAGAAAAATAGAGGATTTGTCCATGAAGATCACAACCTTAACCTTCTCGGTC
ACGCATGGAAGCTTTACAAGGAAGATAGGTCCTTGGAACTAATTGATGAGAAGCTAGCTG
AATCTTGTCATATTTCTCAAGTTTTGAGGTCAATTCAAGTGGGACTATTATGTGTGCAAC
AATGTCCTGAAGATAGACCAAACATGTCTTCTGTGGTTCAAATGCTAGGTAATGAGAGTT
TACTGGCAAAAGCTAAAGAACCAGGATTTTTCATGGAAAGAACGCTACATGATTCAGATA
ATTCAGGAATGCAGACAGGAAGTTCGAAAAATGAAATAACAATGACAATGTTAGATCCTC
GGTAGAGTACTGTGAATGAGGCAACTACTGTTGATAAGCATGAGTAACAAATTATTTTAG
AGGGCGTGATAACGACATTGAAGCGCCTGAGAAGCGCTCAAGCATCACCTCAGGGATTAA
GCGTGCCTTTGAGTATTTAGAAAAATGGTTCATAATTGCCATGCTATTATAAGTATCTAT
TCAACTTGAATTTTCATTTGTATCTTATCTTAGAAAGAAATGTAAATTCTAGTAAGCAAA
AATGTCCAAATTATATAGCCTATGATAATACATAAAATCGAATCAAACCGACAGATGCAC
GAGCTCTCCAATATCTGCATGGAAGAGTCCAATATGTCGTTGAAATTAAAGGTCACAAAC
TTTGGATTTCCATATTTGAGTAAAGAGAAGAAGATAGGGAAAAAGGCCATAAGCCCACAT
TGACCGTGCACGGCCTTTCATATCCATCTCCGCCCATAATAAGGGAAAGTAAACTAATCG
GGTATGAATAGATAAGAAAGTGAGATTTGAATCCAACCCGGCC
