Microarray Probes on PGSC0003DMT400011224
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_44977_PI426222305 |
JHI_St_60k_v1 |
GGTCTTTTATTTCCCTGCATTCAATCTTTCAATTGCAGTGTCCAACTTTTGGTCTATGTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400011224
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400011224 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G10530.1 |
+1 |
4e-149 |
455 |
290/646 (45%) |
Concanavalin A-like lectin protein kinase family protein | chr5:3324978-3326933 REVERSE LENGTH=651 |
Transcript Sequence (2337 bp)
>PGSC0003DMT400011224 2337 pgsc_dm_v3.4
AATATTTTGGGCAACGAAAAACTTGAGTCTGCACTTGAAAATATAAAAACATTATAGAGT
AGTGTAGCAACATACATTTGTTTAACTATGGCTGTTTTTGCATCTGTATCATACTTTGTT
TTGATAATCCCCTTTGTCACTTCATTGTCTTTCAATTTTGATAGTTTTAATCCCAATGAT
CAGAATATAACATATGAGGCAGATGCTTATCCAAACGGTGTAATTCAGCTCACCAAAAAC
GAGCAGGGTAGTGGTTTAAACGATAGCATAGGCCGAGCTACATATTCTAAAACACTCTAT
CTTTGGGACAAGGCTTCTGGGAATATCACCGATTTCACTACTCACTTCTCCTTTGGAATC
AATTCACTGGGAAAAAACTTATATGCTGATGGTCTTGCCTTCTTCCTCGCTCCTGCAGGT
TCAAGAATTCCTGATAAGAAGTCAGCCGCAGGAGGCGGCCTTGGCCTTGCAATTGATAGT
CGACAAAATACATCGAAAAATCATCCTTTTGTTGCTGTTGAGTTTGACACCTTTAAGAAC
TATTATGATCCACCAGGTGATCATGTAGGTGTCAACATCAACTCCATGGTATCTGTTGTT
AATGTGACTTGGTTTAGTAGCATTCCAAATGGTAAGAGAACTGATGCCTGGATTACTTAT
AATTCAACCTCAAAAAATCTTAGTGTTGTCTTCACCGGTTTCCAACCACAAGGGAATACC
ACAGTCACTTTCCTGCAGACTCTATCTTACAATATTGATCTGAGGGACTACTTGCCAGAA
TGGGTCACTTTTGGCTTCTCAGGTGCAACAGGATCCCTCTTTGCATTACAAACCATTTAT
TCTTGGAATTTTACTTCTTCTTTAAAATATAATGACAACATAACAGATCCATTTGTGCCC
CTACCAAGCCCTGTGCCACATCCAGATGTATCCCTACCAACCCCAGATCCAGATCCAGAT
CCAGATCCTTCAAGCAAAAAACTGTCAGGACTAGTAATTGGATTGATTTCTGGCGGTTGT
GTTTCGGTAGCACTATCTGTTTTGATATTGTTTGCATTTTGGAGAAAGAGGAAGGTCAGA
GAATATGAAGATGAAGATGAAGATGATATTATTGACAGTTCCATGACTAATGAATTTGAA
AGAAGCACAGGACCAAAGAAGTTCTTGTACAGTGAGTTGGTTAGATGTACAAATTACTTT
TCGCGGGAAGAGATGCTTGGGCAGGGTGGGTTCGGAGGTGTTTATAAAGGATATCTCAGT
GAATCCAACTCCTATATTGCTGTTAAGAGGGTTTCAAGGGAGTCAAAGCAAGGAATAAAA
GAGTATGCATCAGAAGTCAGGATCATCAGCCGGTTAAGACATAAACATTTGGTGCAACTC
ATTGGTTGGTGCCATCAAAAAAGAGAACTTCTACTTGTCTATGAGTTTATGCCTAATGGA
AGCTTAGATTACGATCTCTTCAAGGGAAGAAGCCATTTGACATGGTCAATAAGATTCAAG
ATTGCTCAAGGCTTGGCCTCAGCGTTGCTTTATTTACACGATGAATGGGAACAATGTGTG
GTGCATAGGGACATAAAGTCGAGCAACATTATGTTGGATTCCAATTTCAACGCTAAACTT
GGGGATTTTGGTTTGGCTAGGCTAGTTGACCATGATAAGGGATCCCAAACAACAGTTTTG
GCAGGCACGATGGGTTACATGGCTCCTGAATGTCTCACCACTGGCAAAGCTAGCAAGGAA
ACAGACGTCTATAGCTTTGGTGTTGTCGCATTAGAAATAGCTTGTGGAAGGAAACCTATT
GATCCTAAAGCTGAGGAGCATCAAGTAAATATTGTCGATTGGGTTTGGAGACTTTACGGG
ATGGGAAATATTCGTGAAGCAGTTGATCCTAGACTCTCATCAGAGATCAATGAAGAGGAG
GTGGAGCACTTGCTAATTGTTGGTTTATGGTGTGCTCATCCAGATAACAATTGCAGGCCT
TCTATTAGGCAAGCAACTCAGGTTCTTAATTTTGAAGCTCCGTTGCCCACACTCCCTCCA
AACATGCCTGTACCGACATATTGCAGTCTGCCACAATATGGACCAACTACTTCATTTGCA
TCACCATACGACTCTAATGGTCCTGGGATATCTGAAATACACTCTTCAGGGACTAGAGAC
TACACTGGTTCTTCAAATAACACAGCAGCTTCTGCAGCATCTTCGCCTTCCGCATCACTT
TTGTACACACGTTGATATTGTCTTATAAATGAACAGGTCTTTTATTTCCCTGCATTCAAT
CTTTCAATTGCAGTGTCCAACTTTTGGTCTATGTATTCTTTATTATTTCTACTTTTA
