Microarray Probes on PGSC0003DMT400011155
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_39979_PI426222305 |
JHI_St_60k_v1 |
CCCATTTGATGAAGACTTGTAATTTGTTGACTCAATATTTCAATGGAAAAGCAGACCTCA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400011155
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400011155 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G19180.1 |
+2 |
6e-23 |
95 |
71/219 (32%) |
jasmonate-zim-domain protein 1 | chr1:6622312-6623271 FORWARD LENGTH=253 |
Transcript Sequence (721 bp)
>PGSC0003DMT400011155 721 pgsc_dm_v3.4
TGATTCTACCCTGCCACTCAAGATATATTTATTCCCCTACTCATGAAGAGTAGTCATCAT
TTTTCTTCAAGCTAAAGAAGAGAATAGATCCAACATGTCAAATAGGCCACTTTCTTCATT
AGATAGTGAGAAATCCCATTTGATGAAGACTTGTAATTTGTTGACTCAATATTTCAATGG
AAAAGCAGACCTCAAAAATCTAAATCTTACAATTAGTAACAATGGAGAAGCCAAAGCCTC
AGCAACCAAGGATTTGTTGACCAACATGGAAGAATCATCAACTAAGACAACAGAGCAAGA
CCAGAAATTAATAGATCATGTTCCTAAAAGTGCAATAAATAAAGCCAGCAGCAGCAAAGA
AATACCAAATAAGGAGCAAAAGCTAGCGCAATTGTCTATATTCTATGGGGGTAAAGTGGT
GGTTTTTGATGATTTTCCAGCAGAGAAAGCCAGAGCAGTGATGTTATTAGCTAGCAAAGG
AATATCTAACAACTCTTGTGCCATTTTTCAAACCACCACCACCACTCAGACTAATGGAGC
CAACAACTTTGATTTACCTATTGCGAGGAGATCTTCACTTTATAGGTTTCTTGAGAAGAG
GAAAGATAGGGACACGGCTAGAGCGCCATACCAAATGCATAATCCATTGCAATCATCTTC
AAGGACTCGTGAAGATCATTTTGATCTCAATTTCTAGTTATAATCAACTTTTCGATCGGA
G
