Microarray Probes on PGSC0003DMT400010866
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_45208_PI426222305 |
JHI_St_60k_v1 |
GAATCAGTCACACATTTCTCTCTGTCTTCTTCTCTGAAACATTTTTCCTATTTTGAAGGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400010866
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400010866 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G11820.2 |
+3 |
0.0 |
786 |
382/459 (83%) |
hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase / 3-hydroxy-3-methylglutaryl coenzyme A synthase | chr4:7109124-7111901 REVERSE LENGTH=461 |
Transcript Sequence (1907 bp)
>PGSC0003DMT400010866 1907 pgsc_dm_v3.4
CTTTCTCTTCCTTATTTGCCCATAGAATCAGTCACACATTTCTCTCTGTCTTCTTCTCTG
AAACATTTTTCCTATTTTGAAGGAAAAATTGTTTGGATCCATTGCGTTTATACTCAAAAA
TAAAAAATAAAAAATCATCAGAAATGGCAGCTCAACAGAAGAATGTCGGAATCCTCGCCA
TGGAAATTTACTTTCCTCCTACTTGCATTCAACAGGAAACGATGGAAGCTCATGATGGAG
CAAGCAAAGGGAAATACACAATTGGTCTTGGACAAGATTGCATGGGATTTTGTACTGAGG
TGGAAGATGTTATATCAATGAGTTTGACAGCTGTTTCTTCCCTTCTCGAAAAGTATGCGA
TTGATCCAAAGAAAGTTGGTAGACTGGAAGTTGGAAGTGAGACTGTTATTGATAAAAGCA
AATCCATCAAGACGTTCCTGATGCAAATATTTGAGAAATGCGGGAATACTGACATTGAAG
GAGTTGACTCAACTAATGCATGCTATGGTGGAACTGCTGCATTGTTCAACTGCGTGAATT
GGGTGGAGAGCGCGTCATGGGATGGACGCTATGGACTTGTTGTATGCACAGATAGTGCGG
TCTATGCTGAGGGACCTGCTAGGCCAACGGGAGGCGCAGCTGCCATTGCTATGCTAATTG
GCCCTGATGCCCCTATTGTGTTTGAAAGCAAGATCAGGGCTAGTCATATGGCTCATGTCT
ATGATTTTTACAAGCCCATCCTAGACAGCGAATATCCAGTCGTTGATGGCAAGCTTTCAC
AAACTTGTTATCTTGTGGCACTTGATTCTTGCTACAAGATCTTATGCAACAAATACGAGA
AATTGGAAGGCAATCAGTTTTCGATAGCTGATGCAGCTTACTTTGTGTTCCATTCACCGT
ACAACAAGCTTGTACAGAAGAGCTTTGCTCGGTTGGTATTCAATGACTTTACGAGGAATG
CTAGCTCCATCGATGAATCTGCTAAAGAAAAGCTGTCCCCATTTTCGTCTCTAAGTCATG
ATGAAAGCTACCAAAGCCGTGATCTTGAGAAGGTATCCCAGCAAGTTGCAAAACCGTTTT
ACGATGAGAAGGTGCAACCTACCACATTAATACCAAAACAAGTTGGCAATATGTATACTG
CCTCTCTATATGCTGCTTTTGCATCACTCCTTCACAATAAACACAACACACTGGCTGGAC
AACGGGTAGTTCTGTTCTCCTACGGTAGTGGATCAACCGCAACAATGTTCTCCCTCAAGC
TTAATGAAGGCCAACATCCTTTTAGCTTGTCAAACATTGCAAGTGTGATGAATGTTAAAG
AGAAATTGAAATCAAGAAACGAGTTGACTCCTGAAAAATTCGTCGAAATTATGAAACTAA
TGGAGCATAGGTACGGTGCCAAGGACTTCGTTACGAGCAAGGATTGTAGCCTTCTAGCTC
CAGGAACCTACTACCTTACAGAGGTTGATTCCAAGTATAGAAGATTTTATGCCAAGAAAG
GTGCTGAGAATGGACTGGCCAATGGTCATTGAAGATAAGTCCAAGCTAGCAACAAGCCGT
AATGCCAACAATTTGGCTTGTGTTGTTTTAGTTTTCAAGTTGTGCTATTTAAACTTAGTG
AGTTTTCAGTTTCTCTGTATTTCTTTTTTCAATTAAAGTTTTAAGAATTCAGTGTTTATG
GCTGCGAAGATGGAATCTGGGACGTAGGACTTGTAGTATCTCTCCAGATCTGGCAAAAAC
GTTTGTTTTCTCTTTGGAGATAATTTATAGATGATTGACAACCATCAATGTAATCTTGAT
TTAAATTACGCATTCGTGGAATTTGGAACTTCAAATTGATGAGCATGTAAGATGATTCGG
ATATCAATTTTATGAAAAAAGTCAAGTAAGAGCATATAAGAATTTTA
