Microarray Probes on PGSC0003DMT400010248
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_3705_PI426222305 |
JHI_St_60k_v1 |
CCTCTTAACAATATGCATGATGCCCAACATTTTAACAAGGTATGCGACATAATTAATCAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400010248
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400010248 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G58450.1 |
+1 |
1e-11 |
66 |
37/68 (54%) |
Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:23626826-23632071 FORWARD LENGTH=1065 |
Transcript Sequence (984 bp)
>PGSC0003DMT400010248 984 pgsc_dm_v3.4
GGGGAATATGTTTAATTGATTATGGGCATTTTTGTCATTTCATTTGTTATCCTTTCTCCA
TTTCATTCCACGTGGTTATTGTGCTGGCATCCTTGCCTCTTTCATCGACCTTCATCATAT
TCTCTTCTACTACATCAAAACAAAAATTGGGCAGTTTTCTTTCATCACAAGGATATTGCT
GCAATCTTAAGTGGATATGGACACAAGTTTCTACGAGTATCAAATAACCTAGACCTAAAG
ATGGGACTCTTTATCTGCTATGTGCGTGAATATTTCATTGTGAAGCAGGTTGCCGGTGAA
GAAAGGTTACTATTTTGGGCAGTATGCAACATTCAATTGCAGAAAGTTTTTGCCACAAGG
TGAACCTTTGCTTGCTTCTTTTTGCCTCTTAACAATATGCATGATGCCCAACATTTTAAC
AAGGTATGCGACATAATTAATCACATTCCATTTTTACTTAATACACTTCTCCTCTGAACA
ACATGTTTTTTTGTCAACTGCAGTGTCGCACAGATGCAACAACAATTAAGAACGACAAGA
TAACTACCACCTATAGAAACAAACCTCTGTAAAAGTATATAAATAGCGCGCATACACACG
CATATAGGTGTCTATATATTAACAACTCTTTTACTAATTGCTGCCCTACCATTATTTGTG
ACATATGTAGCCTAATATATATTGGGTTCCGTGCTTGCTCGGGATTTTTACATTCGTCAA
CTTGGCTCAAGAGAAAAGTAAACAACATGACTTGTTTTAAGAGAAAATTACGCGGTTAAG
TAAATTTATACTATTCAATTATTCATCATAGCTATAGGTTGCTATAATTATCACTCGCGA
CTAACATCATACATTAATTATGTGGGCTGACTTCGAGTTTGTATAATTAGCCACGTTTGT
ATATGTATAATTCGCAGCTAACAATTCTTTGCTTGATTTGTATTTGTATACGATTGTTTG
TATTTTGTATATGACGATGATTCC
