Microarray Probes on PGSC0003DMT400010100
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_44287_PI426222305 |
JHI_St_60k_v1 |
GCTTATCTTTCGAGGTTCTGTCAAAAGCATTCACTCTACTTGTGAAATTAGACTTTTTGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400010100
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400010100 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G45360.1 |
+1 |
5e-66 |
211 |
113/207 (55%) |
Protein of unknown function (DUF1442) | chr2:18698619-18699360 FORWARD LENGTH=215 |
Transcript Sequence (1111 bp)
>PGSC0003DMT400010100 1111 pgsc_dm_v3.4
CCCATTTTCACTAACTTCTCCTCAAAGAAAAAACACCAAGAATTCACCAACTACTAAAAC
CCCATTTACACCAATCAACAAATTTCAAAAACAGAGATAAAGAAATGAAGTTAGTTTGGT
CTCCAGAAAAAGCATCTAAAGCTTATATCGATACTGTTAAATCCGTAAGTATATACATAC
AATTTCAACAAATTCCCAATCCCCTGTTTTTTCCCTTTTCCCCCTTTTGTTTTTATTCCA
ACAGTTGTTGATTTTCTTGATTTTTCGATACAGTGTGAGATATTTCAAGAATCGAGTGTA
GCAGAGATGATATCGGCTATGGCTGCAGGATGGGATGCTCAGATGATTGTGGAAACATGG
TCGAGAGGTGGGGTTATGGCTACAAGTATTGGATTGGCTGTGGCAAATCATCATACAGGT
GGTAGGCATATATGTGTAGTACCAGATGAAGATTCAAGAACAGAGTATGTAGAAGCTATG
GAAAAAGCTGGGATGTCGCCAGAAGTTGTGATCGGAGAACCGGAAGAAGCGATGGATGGG
TTGATGGGGATTGATTTTTTGGTGGTGGATTGTAGAAGAAATGATTTCGGTAGAATTTTG
GGAGTTGCTAAATTAGGACACAGAGGTGCAGTTTTGATTTGTAAAAATGCAAGTTCAAGA
ATTGCTTCTGATTTCCGGTGGCGGAGTGTTCTCGACGGGAAATCAAGAATTGTTCGGTCG
GTTTTTCTGCCGGTAGGCAAAGGTCTGGATATTGCTCATGTCGGAGCCACCGTGAAAGGC
GGCGGAAAAAAGGGTGGCTCCGGGAAGACAGAAAGTCGATGGATTAGACATTTTGATAGA
GATTCAGGGGAAGAATTTGTGATACGCAAGTGATGAAGTCCAAAATTCAAAATTCTGTTA
TAGTATATTTTTTTTCTCTTGTTTAATTATTTTTCTTTTAGGTTTTTGTGTATATTATAG
ACGATACAAAATTAACCAGGTTCCTGTCTTGCCAATTTTGATATATGCTAGTGCTTATCT
TTCGAGGTTCTGTCAAAAGCATTCACTCTACTTGTGAAATTAGACTTTTTGATATATGTC
AATGCTTATATTTCGAAATTTTATCGAAAAC
