Microarray Probes on PGSC0003DMT400009959
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_28483_PI426222305 |
JHI_St_60k_v1 |
CCAGATAGCATTTGAGCTTCGAAGACCTCATGGCCTTCTAGATATATTTACTGAACTCCA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400009959
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400009959 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G16750.1 |
+3 |
0.0 |
247 |
116/173 (67%) |
Transducin family protein / WD-40 repeat family protein | chr5:5504541-5509266 REVERSE LENGTH=876 |
Transcript Sequence (2144 bp)
>PGSC0003DMT400009959 2144 pgsc_dm_v3.4
AGGTTGTAAATCTGTGTAACTTGCATGACTACCGCTGCCTGACCACCATACCAACACTTG
AGTCAGTTGAAACCGTGTGTTCAGAGGCTCCTTTTTCTGCATGTCTAGCTTCATCAAAAC
ATCCACAGGCAAAGAAGAGAAGTGATGTACCATCAGTTAATTTCATCACTGTTGGTGAGC
GTGGATTAGTGCGGATATGGAGTTCTGATAGGGCACTGTGCCTCTTTGAACAGAAAACCT
CCGATATCACCGTAAGCTCTGACAATGAAGATTCAAAGAGGGGCTTTATTTCTGCTTTGA
TTTTGCCTGCAAATCAAGAGTTGCTCTGTGTTACAGCAGACCATCAGTTTTTTCTATACT
ATCCGGAGGAATCTGAAGGTAGTATGAATCTATTTCTTAGGAAGAGGTTTGTTGGATACA
ATGAAGAGATTGCAGATATGAAATTTTTGGGTGACGATGAACAGTCCCTTGCAGCCGCAA
CAAATGTAGAGCAGGTACGAGTGTATGATCTTCAATCAAAGTTGTGCTCTTATGTATTGT
CTGGACACACTGATACTATTTTGTGTTTGATACCTGTGTATCAAATTCTGGAAGCAAGGA
CAACAATGTTAGGTTATGGGATTGCGAGAACAAGGCTTGTGTTGGCGTAGACATAGGTCA
CATGGGAGCTGTTGGTGCTGTTGCTTTTTCCAAGAAAGAACGGAACTTCTTCGTTAGTGG
TAGTAGTGACCGTACTCTAAAGGTATGGAATATGGACGCTGTCTCTGGAAACAATGAAGA
AATTATAACTCTGAAAGCAAAAGCAGTTGTAGCAGCACATGACAAGGATATTAACTCTTT
GGCAGTAGCACCAAATGACAGTCTTGTTTGCAGTGGTTCCCAGGATCGCACTGCCTGCAT
ATGGAGCCTTCCAGACGTAGTGTCAGTGGCTACACTCGAAGGGCATAAAAGGGGGATATG
GTCTGTGGAGTTTTCTCCAGTTGATCATTGCGTGCTAACAGCTTCTGGAGATCAGACGAT
AAAGATATGGGCCATATCCGATGGATCATGTCTAAGAACATTTCAAGGGCATATCTGATG
GATCAAGTGTGTTAAGAGCATCGTTTCTTACCCGTGGAACCCAGCTTGCTTCTTGTGATT
CTGATGGTTTCATGAAGTTGTGGACAGTTAGGAACGAAGAGTGTATCGCAACATATGACC
AACATGAGGATAAGATATGGGCCCTGGCTATTGGTAAGAAAACAGAAATGCTTGCAACTG
GCGGTGGTGATGCAGTGATCAATCTATGGCACGACTCAACTGCTTCAGATAAAGAGGAAG
CTTTTCGTAAAGATGAGGAAGGTGTTCTACGGGGTCAAGAGTTAAAAAATGCTTTAATAG
ATGCTGACTACACAAGAGCCATCCAGATAGCATTTGAGCTTCGAAGACCTCATGGCCTTC
TAGATATATTTACTGAACTCCACAGGAAGAGAGATGCAGGAGATCAGATAGCAAAAGCAG
TTAACGCGCTTTCTAAAGAAGAGTTGCCTTTGCTTTTGGAATATATCAGGGAATGGAACA
CAAAGACACTTTTGCCATACTGCAAACTTTGTTCTTTCCTGCATTTCGATTACTAAGATG
ATTGAGATAAAGGGCAATGAAGAAGTGCTTGAAGGTCTTATTGCTTATACTCAGAGACAT
TTCAACAGATTAGGAAGATTAGAAATAGAAAATCATATGCTGGGATATACTTCATATAGA
ATGTCAGCCATTGAACCAGAAGGGAAAATTGAGAACAAGGATGTCACACTTTGTACTGGT
CAGATAATGAGCAAGACATTCAAGAGAAAAAATCATCAGAAAAGCGAAAATCGGATATAT
CAAGAGATGTCGCGGGTAAGAAAGTGAAGAGGTAGTAGACTGGACGTGGTCGTACAAGTA
ATTTAGAAATCAGATATAGGGACACTTGTAATCTACTACTCCTTCTGGACTACTTTACTT
GTCACATTTTTTTTTGTAGTTTTACACGCCCTGTAAGAAATTATGTGTTTTGACTATCAT
AGCTTTATTTATCATCGTTAATTGTTTTTCCGCCAATTGAAATTGTAAGACAAAGCAATA
TGCACAATTTGTTAGACGACAAGGGTATATAATGCACCATTTTT
