Microarray Probes on PGSC0003DMT400009949
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_28489_PI426222305 |
JHI_St_60k_v1 |
CTGGAGGAAAACTATTGAATTCTGTTGAACTCGTATCTTGTACTGTAGAATACAAGAAGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400009949
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400009949 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G22920.1 |
+3 |
1e-151 |
438 |
183/281 (65%) |
CHY-type/CTCHY-type/RING-type Zinc finger protein | chr5:7665143-7667031 FORWARD LENGTH=291 |
Transcript Sequence (1506 bp)
>PGSC0003DMT400009949 1506 pgsc_dm_v3.4
TAAAATAAAAAGTTGTTATGCATTATTGTTTGAACCCTTTTTGTTTCTTGTTCTTATCTA
CAAAAAAAATCCCAAAAGGGATTTTTGAGTATCCATTGGAAAAATATAATCTTGATTCAG
TAGAAAGGGTGAAGAAAATGGAGTGTAGTTTGAAGGAACATATAACCACTCTTTCTTTTG
CTGCTGATGAATCTGTGGCAGAAATGGCTTCTGGAAATTATGGGTGCTCGCATTATAGAA
GGAGATGCAAAATTAGAGCACCTTGTTGTGATGAGTTATTTGATTGCAGACATTGCCATA
ATGACTCAAAGAATTCTTTAGACGTTGATCCACTCAAACGACACGATATTCCTCGCCATG
ATATTAAAAGGGTCATTTGCTCATTGTGTAATACTGAACAGGATGTTCAACAAAAATGCA
TCCAATGCGGGGTTTGCATGGGGAAGTACTTTTGCTCAAAATGCAACTTCTTCGATGATG
ATGTCTCGAAGAATCAATACCACTGTGATAAATGTGGAATCTGCAGAACGGGTGGCGAGG
AGAATTTCTTTCACTGTGACACATGTGGATGCTGCTATACAAATTCGATGAAGGAATCAC
ATAAATGTATAGAAAGAGCGATGCACCACAATTGCCCTGTTTGCTTTGAGTATATTTTTG
ATACAACAAAAAACATCATTGTCTTGCCTTGCGGTCACACAATGCATCTGGAATGTGTCA
TGCAGATGGAACAACATTTCCAGTATTCTTGTCCTGTTTGCTCAAGATCATACTGTGACA
TGTCTCGAGTCTGGGAACAACTGGACCAGGAGGTTGCGTCAACAGCTATGCCTGAAATGT
ATCAGGACAAGAAGGTTTGGATTCTTTGCAACGACTGTGCGGAAACATCTGAGGTTAACT
TCCATATAGTAGCACATAAATGTCCAAGTTGCAAATCCTATAATACAAGGCAGACAAGAG
GAGGGTCCAGTTCATGCTCTAATATTACCGATATGATCAGATGAGGTTCTTGATCGCGAC
ATTGGATCAGATTTTTTCTTCAAATTACTATTTGCCTGATTATAAACGATGAAATCAATG
CCCACGAGTCACGACTGCAACAATTGGTATGATTATAACTTCATTATTTTCCATGAGTTT
ACCTCAGAAAGCATCGAGGAGGAATTTACATGTCATTGCTTGCAACAAGGGAGTTGTTGA
ACATTCTTTACTTATTCTTTCACGTAATCTCTCTCTGTATTGCTTTATGTAGAGATGGAT
TTAGGATTTTAATTTTATAAGTTCTGAACTCACAGTCCTTTTTTACTTTTCTAGCTTCGA
GATGGATTAGTTATATGTATTGAGTGGATTCTCCTCAACACAAATACAAGTTCTGGAGGA
AAACTATTGAATTCTGTTGAACTCGTATCTTGTACTGTAGAATACAAGAAGATATTCCAA
AATGAACTTTGATTAGTAGTATTTGTGCAAAACTTAATTAAACTTGACAACAGTGTAGAT
TTTGTT
