Microarray Probes on PGSC0003DMT400009594
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_7680_PI426222305 |
JHI_St_60k_v1 |
GCATATAGCGGGAGCTTTAATGTACCAGATTGTCCTTTCTTCTTCTTTTTATTTAAGTTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400009594
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400009594 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G19640.1 |
+1 |
9e-125 |
372 |
201/388 (52%) |
jasmonic acid carboxyl methyltransferase | chr1:6789166-6791708 REVERSE LENGTH=389 |
Transcript Sequence (1395 bp)
>PGSC0003DMT400009594 1395 pgsc_dm_v3.4
AAAAAAACAAGAGAGGAAAAAGAAATAGTAATAATAATTATAAAGATGGAAGTTATGCAA
GTACTTCATATGAATAATGGAGAAGGAGAAACTAGCTATGCTAAAAACTCCAATATTCAG
AGGAAGATAATATCAGCGACGAATTCAAGACTTAAGGAAGCAATATTAAACATTATGTGC
AACAACAACAACAACAAAAATGTGCCGGAGAGCATTGGTGTTGCAGATTTGGGTTGTTCT
TCTGGACCGAACACATTGATGGTCGTCTCTGAGATTATAGATATCATAGATGAAACATCT
CGAAAATCGGGCATATCCTTCCCAGAGTTGAGAATTTCTCTTAATGATCTTCCTGGCAAT
GATTTCAATGACATATTTAGGTCATTGCCATCATTTTTTCATAAAGTTAAAGAAGAAAAA
GGTGCAGAAAATTGCTATGTTGTTGGAGTTCCTGGTTCATTTTATGGAAGGCTTTTTCCA
CAAAAAAGCATGCATTTTGTTCACTCTTCATCTAGTCTACATTGGCTCTCTCAGGTTCCT
CTTGGTTTGGGTACTAATAATGCAATTATGTCATCTCTAAACAAAGGGAAATTATACATA
TCACATACTAGTCCAAGTGATGTCATCAATGCATACGTGTCACAATTTCAGAACGATTTC
TCCACATTTCTCCGATCACGTTCGCCGGAAATAGTCCCCGGCGGGAGGATGTTGTTGTCA
CTAATGGGGAGGAGCTCTATTGATCCCACCATTGAAGATGGTTGTTACTACCAATGGGAG
CTTCTTGCAAATGCGCTCTCTAATTTGGTCTCAAAGGGTCTAGTAGAAGAGGAGAAAATA
GACTCATTTAATGCACCATACTATGCACCATGTCCTGAGGAAGTGAAAATTGCTGTAGAA
AATGAAGGTTCATTTATGATTGATCGTATCGAGACTTTTGAGATTGAGTGGGACGCTAGA
GTTTCTTCAAATTCATCGGAAGATAAAATATTATTATCAAGGGGTCAACAAGTTGCTAAA
ACAATTAGGGCTGTGGTTGAATCAATGGTGGAAAATCATTTTGGAAATGAAATTATGGAT
GATTTGTTTAGTGTATATGGTGATCTTGTGGATGATTACATTTACAAGAAGAAAGCTGTT
TATGTTAATTTGGTTGTTTCTCTCAAACGTAAGGAATGAATTTATGTTCAAATTAAGTAG
TAGACTAAGCAAAATTATCTTTATAAACTCCACATGTTAATAAGGGGTTGGATCAATACC
CTTCTCCAGACCTGCATATAGCGGGAGCTTTAATGTACCAGATTGTCCTTTCTTCTTCTT
TTTATTTAAGTTGAATCAATACATGTCAACTACTTATTGTAATATTTGTGTCTTAATTAA
TGAAATCATGTTTTG
