Microarray Probes on PGSC0003DMT400009328
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_5232_PI426222305 |
JHI_St_60k_v1 |
CCTTATTGGATCTCCATGCCTGGGAGAATTGTGAGTAGTGTGTTAAGTGTCGTTTATCAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400009328
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400009328 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G21320.1 |
+2 |
3e-61 |
204 |
102/181 (56%) |
B-box zinc finger family protein | chr2:9126502-9127652 FORWARD LENGTH=172 |
Transcript Sequence (1997 bp)
>PGSC0003DMT400009328 1997 pgsc_dm_v3.4
GGTTGGTGAGTTGTATTCTGCATTGTGTCAAACTAGTGTACTATTCAACTTTCTCCATAC
TTAAAAGTTGCTGTATTTGACTAAATAGACTAGTTAATTCTTGATAAAGAGTAGTTGAAG
GAATCTAGGTAATAATATGAGGCTTTATATTGTTTTATTATTGGGTGAGTTGTGGTAGAA
ATGAATTATGCGGACACTTTGTGATGTTTGTGAAAGTGCTGCTGCCATTCTTTTCTGTGC
TGCAGATGAGGCTGCCCTTTGCCGTGCCTGTGATGAAAAGGTTCATATGTGTAACAAGCT
TGCTAGTAGGCATGTGAGGGTTGGACTTGCTAAGCCCAACGAGGTTCCTCGGTGTGACAT
ATGTGAAAGTTCACCTGCATTCTTTTACTGTGAAGTTGATGGAAGTTCTCTTTGTCTGCA
ATGTGACATGATGGTACACGTTGGCGGTAAACGAACACACAGTAGATATCTCCTGTTGAG
GCAGAAAGTTGAGTTTCCAGGAGACAAGTCTGGGCCTACAGAGGAATTAGCCAGGAAGAC
ATTAGATCCCGGTGAAAATAAGAGGGATCATAGTCACTCACCAAAGCCAATGGTTAAAGA
CAATCAACAAAATCACAGGGGGTCTCCTATCCTAATTTCAGATGGGAGTGCAGATGGGAA
TGGCAAGAAGGACAAAATGATCGACTTGAATGTGAAGCCAAATCGTTTTCATGGTCACGC
ATCTAATCAGGACTAAATCATCTTCAGTGATTGTTCCAGCCAGATATTCTATGAGCAAAT
GTTCGTGAGGCGTCAAATAGACCTCATGTGGCATGCATGTTCCACCTTTGCGCATATGAC
TGAAGCTCAGTAGCCCAGATTAGTAATCGAACAATATTTGGCAATTAGTGTTAGATAAAG
CGCAAGTTCTGAATGCGTTGATTTTTCGCCAGTCTCATGATCATTATTTGCTTTAGGATT
TAGTTTTGCCATTAAGACAACATTGAAGAAACTGCCTGCTGAAAGTAGCTGATGTAACTG
AAGTTTATGATGATTATAGTAGAAGTTATTGTTGAAAGTCAAGAGGAGGGTGAATTAAAA
TTTCCTTTAGTCGACTTCCTGTAATGGCCAGTCGACTCACCTGCACGTTAGTAGAATAAA
TAAACAGTAATAATAACTTGCAGTAAGTAAATAACACAGTGTGTTTTTATATTGGTTCGG
ATCACCGATGTGATGCCTAGTCCAATCCCCTTGGGTTACAAGGGTTTCCTTAAGAGCTTG
TTGAGAACTTGGGTGTTACAGAATGTTACAATTAAGACCCCCGTCTGATATGCAAATCAG
ATCTTCTTCTTAGACACAACCTCTACCTGTATAATCTACACTCAGATCTTTCTTTCTCTT
TTTCTTTTCAATTGTTCACTCAAGTGTGTACAAAGTTTTATGAAAGACAAAAGAAGATTA
CAAGTGCATACTTCACATCTAAGTGTGAGGAGGTATATATATATGAACAGACTTGTGCTC
TTGTAAGGAAAACCCAACGGAGTTATACTTCAATCAAGGATTTGAGGAATCCCTTGATTG
AGACGATTTGTTGTTCCATGTCCATATTAGATATGTGCATGGTAAATCGCATTCCTTCCT
TCTTGACAGATATGATTCAATTATGTGCTTGGCTGAAGGATTTATCTTGACTCTTTGGCT
TGATCTGATTTCCTTTCTTCTCTTGATGGCTTGGCTCTATTCTTGGCTTGATTGATGATT
CCTTGATCTGGTTCTATCAATCACGATTTGCTTGATTGATCTTCTGCCAGCTTATTTGCT
TGATTGATCTGCTGCCAGTTTTAGGCCTTCTGTTAATGATTGTTTAATCCCTTTGATTAT
GCCTTTCCTTTATGAAGTAATTGTAAGGATCAAAATATATTGCTTTCCATGTTGGTGTTG
TTTTGCTTGGATCCTTTCCTTATTGGATCTCCATGCCTGGGAGAATTGTGAGTAGTGTGT
TAAGTGTCGTTTATCAG
