Microarray Probes on PGSC0003DMT400009298
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_5310_PI426222305 |
JHI_St_60k_v1 |
TCTTCATCGGCCTGTTCCAATTTATGTAACACACTTTCTATGTTATTCTGTCCAAAAAAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400009298
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400009298 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G27660.1 |
+2 |
3e-22 |
100 |
53/97 (55%) |
basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr1:9621701-9625666 FORWARD LENGTH=453 |
Transcript Sequence (1871 bp)
>PGSC0003DMT400009298 1871 pgsc_dm_v3.4
ATTGCACATGTTTTCTGAGATTGCCATCATTGAATAGCCTGCTAGCAAAATGAATAGGGA
CACACACACACACACTCATCTCAGTGCACATTAATTCTCTTCTATTCCTTTGTCTCTCTT
GTGTTTATTATGTAATTCCCCTCAAATCTCTCTCTTCCTAACTAAACCGACCATGCGTGC
AAATATACGTTCTACAAAGTTTATAACTAGCCTTGAGAAAAAACTAAATTAAACCTAGTC
ATTCAACAACGTTTTTTTTTTTGATATAATTGAATTATATTCTAGATTTGGCCATGGATT
CTACGAATCTTTATAATCATCATCAACTTCAACAGCTTGCTGGATATCCCTTTTTCAGTA
CTGGAGTTTCAACTATACATGATTGGAACTCAAGCATCACCTCGGAAGAAGAATATTACT
ACAAGCTGGGACACATGAAAAGGATCCAGTCAGAAGAGCTCATGTGGAAAAGAGGCATCG
ATACATTTCCATTAATGAACACCTCAATTTTCCACGACGACGGATCCAACGATCAGCTGG
ATGATAAAAATAACAAGGCCGGCGGCGGCTACATAATATCCAATGATTATTTCCTCAAAA
TGAAAGATATGAATGGTTTGATCAGTAACAACATGTTCAAAGAAAGTTACTTTGAAAACG
AACAACAACATGCTTTTGATCTGAACGATAATCTTCTGTCCGAAGATTCGTTCATGAACA
ATGCTAATAAAACTAGCATTGCTTTTTCCGGTTTAGCTGCTGCTGCTGATATGGAAAATT
CAGATTTCCAGGGGTTGAAGTTAGCATTTAATGGACTAACTTTCAACAACAATGATAGTA
ATAGTAATTGCTTCTCTACAGACAGGATGTCTTCGGGTTTTCTACAAGAATTAACCCATA
CTCCATCATCCAACAAAATCACATCAAATGTCATTGGAGTTTCTTCAAAAGCAAAGAGAT
CTAATTATTCTGCTGAAGATGAAGCTACTCCATGTCAAGAAGCATCAAAGAAGCCTCGAG
CTACATCGCAATCTCCAAGCACATTAATGCTTAAGGTGAAAAAGGAATTAAGAGGAAAGA
AATTGAAGTTAGTATATAATTAAAATTCCCACATAACAATCAAAAAATTCTTATCAAGGT
TATAGCTATGCTGAAGTGAAGTGTGTAACTGTCTCATCTAAAAAGTTGAAGTTGTTAGAT
AAAACACATTTTAGTTACGTGACCTCGAGATAAATTACATGTTGTTTTGAAGCAGGTTAG
AAAGGAAAAACTAGGAGACAGGATTTCAGCTCTACACAGATTAGTGGCACCTTTCGGCAA
GACTGATACTGCATCAGTATTAACAGAAGCCATTGGCTATATTCAGTTCCTTCAGGACCA
AATACTTACATTGAGCATGCCTTATACGAAATCAACTGAAAGGAAGCTCCATCACATAAA
TCTAAAGGATTCGAGCATACAGGCAGTGGTAGATCTAGAGAGTAGAGGATTATGTCTTGT
GCCAACATCTTTTTCTTCTTACATCTCTCCGTCCTGTGATTGAGAAACGTTGGACAACTA
CTCCATTAATTATAACTTTAGTGGAAGCATATGGTGGGTAGGATAAATTGTACAGTTACT
GTGACTTTTCATGCCCAAATTGAAGTCATGCAGATAATAATGTTTATCGTGACATACTAT
ATGTTTAATTTGCTATTAATAATCGCTTAGAGATTAATAGCGTTTTCCCTATACTGAGTG
TTGTCCATTGTGCTCTTTATGTAAATTAAGATTTGGAGGAGGTACTTATCACTCCGCTCT
ATTTTGTACTCTCTTCATCGGCCTGTTCCAATTTATGTAACACACTTTCTATGTTATTCT
GTCCAAAAAAG
