Microarray Probes on PGSC0003DMT400009232
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_5277_PI426222305 |
JHI_St_60k_v1 |
AGTTTGGCAACTCATCTATTTTCTACTATCCTCGTTTTTCTCATACAGGTTCCCGATGAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400009232
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400009232 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G20110.1 |
+3 |
2e-82 |
278 |
195/456 (43%) |
RING/FYVE/PHD zinc finger superfamily protein | chr1:6971554-6974578 FORWARD LENGTH=601 |
Transcript Sequence (2365 bp)
>PGSC0003DMT400009232 2365 pgsc_dm_v3.4
CCCGGTCCAACTTGTATCCATTTCCGAAGTTATCCATATTCCATTAACGGGTACGGATCG
TTCATCAACAAGCCTTTTCCGAATTCCTCTCTCCCCGACTGTTAACGGAACTTTCCTTTC
CTTTTCTTGTACATTCTTCTATACCCAAATCCTTCAGAGTATCACAACTCCATAATTGCA
ATAATCGCCATCTCAAATACCTATCTTCTTCTCAAAACCAATTCAATCGATCAGCCAATC
GCCGGCCGTTCAATTCTTTCTCTTCTCCGATCAGTTATAAATATTCCGATATGCAACACG
GCGACCCTAGCTCTACCTATTACCAACATTACCAGCCTCCCTTTCAAAACCCTAACCCTA
GCTCTACTCCTGCCGATCAACCTTACAATCCGGCTCCCCTCCCTAGCCAATACGCCTCTG
CCCCGCCGGTTGCTTCCGGCGATTACTCCAATTACACATCCACTTATCCGCCTTATTCTC
AGCCCTCTGCCGATCATGCCCATAAACCACCTGCACCGTTCCCTTCAAACCCCAGCTCTC
AATCGTCCTACGGTTTCCCCCACCTTGAGGCTCCGCAGCCCAACTATTACCCTTATGATC
AAAACCAAGCACCTGTGAGTTATGATTATGCTGCCCCTGGCGCTAATTACCACACACTAA
ATCAACCTAATTATAATTCAGTGAATTCATCTGCTCCTTATTCATCAACGCCATTTGGTG
TCTCCGCAGGGACTAGTCATGGTAATTCGTTTGAGAATAACTCGGATTATGGTTCATATG
GAGACCAAGGGTTGTATGAGAGTGGTGTTTACAAGTATAATGGAAAAAAAGAGGAGTCAT
ATAGTGGAAATCAATCACAATCAAGTGCGGGTTTGATGTTTGATGATTATGGAAGACCTA
TCAATGTTCATAGTGGGAGTGGGAGAGAGCAGCAGCAGCGACCTGTGAATACTCCTAAAG
TTGTGAAAGCAGCACCTAAGGTTGAGGACCAACAAGATGCCACAGGTGGTGTTCTGAAGT
TTCGGGTCAAGCTTTTATCAGAAGGCATTGGTCAGAGTGACATGGATGTGCTCTGTCAGA
TTGGTCTAGATGGGATTCGCATACTTGAGCCTGCGACTAGCAGAACCCTGAGGATATATT
CACTCGAGAATGTGACAAAACTGGAGGTATTGGATTCATATATATTTGCATTTTGGGCTA
AAACTTCTGTCGACAATGAAGCTAAACGTATCAGGCTGAGATCAAATAGCTATACCACAA
ATAATATTCTTGATGCAGTGACAGCAGCAAGTATTCAGGTCAAAGAGATGGGCGAGAGTA
ATATGCCTTCAGATGCAATTACGGGATCTGAGTCAGCTGCTGAGAAGAAGAAAGGTTTTG
ATTGGATGAAGTTGATGAGGCCACTAAATGAAGAGAAAGATCACTGGGTTATATTATAAT
CTAACGACTATCTATTTCCTTACTTATTGCAGCATTTTCTTCTATTTCTTCTGAATGAAA
CTTGTGCAAGGATATAAGTTTGGCAACTCATCTATTTTCTACTATCCTCGTTTTTCTCAT
ACAGGTTCCCGATGAAGCAATTCGAAAGTGCACTGCTTGTGGGACAAATTTTAGTGCTTT
TGTACGAAGGCACCACTGCAGAAATTGTGGGGATATTTTCTGTGACAAATGTACTCAAGG
TAGAACTGCTTTGACTGCAGATGAAGATGCTCAACCAGTTCGAGTTTGTGACCGATGCAT
GGCTGAGGTAACTCAAAGGCTCAGCAATGCTAAAGCAGCGGTCAGAGTTGCTGCAATGCC
GAGTCATGTGGACCTTGCAAAAAAACTCCAGGAGGAGTTGGACAAAAAGCGGAAGACATC
AACAGGTCATACATCCCAAGGATCCAGGAGGATGAGAGAGGTTGCATGCCCAACTTGCAC
AGTCCATTTGCAGGTTGAAGTCCCGGCTTCTGGATCAGAAACGATTGAGTGCAGTGTCTG
CCAGCACCCATTCCTTGTTAGTGCTCATTGACAGGCAGGGTCGGTGTGGTTTGCTTTGCA
ATCATCCTATATGCAGGGATGGATTTGAAGCCACCACAATGGTCCTTCCAACTTTATATG
ATTGTTTTTAAGGCGTATCAACTTGTGTCTTCATTGGTGTTTTGTTAGCTCTCTCTTTCA
ATATTGTAAATTTATTAACAGTAGTCAGTTCTATGAGCTTTTTCTCGGTTGTGTGCATGT
ATAGTACACGTGCTTCATGTCGTGAAGCACTTGCAAAAGTGATTCACACATAATATGATG
CGAGGTGCATGAAACTAACTTGTTCAGTTCATTGTGCAAATCAATCAATTTTCAGTATTT
TGAATCCTTTACACATATATTATTT
