Microarray Probes on PGSC0003DMT400008245
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_10367_PI426222305 |
JHI_St_60k_v1 |
CACATGCAAATTTGAATCTTGAATGTACGTGGAGCTGAGGATTATAGTATTGACTTGTAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400008245
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400008245 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G55430.1 |
+2 |
1e-152 |
448 |
232/446 (52%) |
O-Glycosyl hydrolases family 17 protein | chr3:20549806-20552004 REVERSE LENGTH=449 |
Transcript Sequence (1568 bp)
>PGSC0003DMT400008245 1568 pgsc_dm_v3.4
AAATAAATCATCTATCTCCACATCAACCATTTTCACATCAACCATGAACAACATATCAAG
CAAAACTTCTTTTATCCTATTCTTCTTTGTTATTGCTCTTTTTCTTCATGATGTAACTTC
TATAGGTGTTAACTACGGGACTCTCGGAAACAACCTCCCTCCGCCAGCTCAAGTAGCTCA
GTTTATCAAGGATAAAACGGTCATAGACCGTGTAAAGATTTTCGACATCAACCCAGACAT
CCTCCGTGCTTTTGCAAACACGGGAATCTCACTTACTGTCACAGTCCCAAATGGCGAGAT
CCCGAATCTTCTGGATCTCGCCTATGCTCGACGATACGTCGAGCAGAATATTAAACCTCA
TTATCCACAGACAAAGATCGACGTTGTTCTAGTAGGTAATGAGGTTCTTCATTGGGATAC
ACCTGAGGTACAGAACAAGCTTGTTCCAGCTATGAAAGTTTTTTACCAAGCTTTGGGTTT
ATCTGGGTTGAAGGGTATAAAAGTCTCTTCAGCTCATTCATTGGGTATTCTTCTCCGTTC
GAACCCACCCAGCGCAGCCCGGTTTCGACCCGGTTGGGATGTGGGTATTCTAGCTCCGAT
GCTACAATTTCTTCATGAAACAAAAGGTCCTTTCATGGTAAACCCTTATCCCTACTTCGG
ATACAACAAGAAGCAAGAGGATTTTCTTCTATTTAGAAAGAATAAAGGGGTTTACGATCG
ATTTTCGAAGAAATGGTACATGAATTCGTTCGATATGTTGTTGGATGCGGTGTATATGTC
GATGGTGAGATTGAAATACCCAGATGTGGAGATTGTTGCTGCGGAGACAGGGTGGCCTTC
GCAAGGAGAAACGTATGAACCGCAGTGTACTGTGGAAAATGCAGCTTCGTATAATGGTGG
ATTGATGAAGAAGTATAATTCCGGGATGGGTACGCCATTGATGCCGCACAGGAAGATCGA
GACGTACATTTTTTCATTGTTCAATGAGAATACCAAACCTGGGTCGATCGCTGAGAGGAA
TTTCGGGTTGTTCCGACCCGATTTCACTCCGGTTTATGATGTCGGAGTTTTGAAAGCTAA
ACAGGCTCACCCAACACCTTCATTGCCCCCACCAAAAACCGGTGGCGGAGGCAACAAAGG
GCAACCAAAAACACCAGCAGAGAACAAAAAATTCTGCATGCCAAAGGTTGGGGCAACTGA
TGCACAACTACAATCCAACATTAACTATGTGTGCAGTCAAGGAGTTGACTGCACACCAAT
TCAAGTGGGTGGTTCGTGCTTTAAACCCAACACTATTCGGTCTCATGCGGCCTTCGCCAT
GAACTCTTACTACCAAAGGGAAGGCCGCAACAACTTCAACTGTGACTTTGCCGGTACTGG
TGTAGTTGCCGCCTCCGATCCAAGTTATGGCACATGCAAATTTGAATCTTGAATGTACGT
GGAGCTGAGGATTATAGTATTGACTTGTAATATTTATGAATGTTATGTACTTTGGTTTCA
CATATTAATCTAATTGTATTGGTTTGGTATGTAAACGTTCTTTTTATATATATGATTTAA
TTTGCCTC
