Microarray Probes on PGSC0003DMT400008122
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_11640_PI426222305 |
JHI_St_60k_v1 |
CGGAGGGAGTATCATTCAATGAACTGCTTGATATCTGACACTTTGTTGTTACATTTTATT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400008122
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400008122 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G53170.1 |
+2 |
0.0 |
566 |
263/413 (64%) |
Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:19704600-19706417 REVERSE LENGTH=499 |
Transcript Sequence (3250 bp)
>PGSC0003DMT400008122 3250 pgsc_dm_v3.4
GCTTTGCGGCCCTTATCGTCTTGTTTGTGGAGGAGGGGAGTGAGTGGGTATGGAGCTTCA
GTTTGCAGGCGCATCGTATTTGATGAAAGAAGGTATAAAACCCCGAGGTTTGATTATCAA
ATCATCAAGTAGTACTTCACAAGGGCTGCAGAAATGTTCAAAGAAAAACCTTTCTCGTAT
ACTTAGAACAGAAGCCGCCATTAGAGGTATCCAGAGGAAAGCCAACTCAGAAAAATACAC
TAATCTTTGGCCCAAGGCCGTTTTGGAGGCTCTCGATGATGCTATTAGGGACAATCGCTG
GGACTCTGCTCTTAAGATTTTCGACCTTCTTCGCAAGCAACATTGGTATGAGCCAAGATG
CCATACATATGCTAAGCTTTTGGTAATGCTCGGCAAGTGCAAGCAGCCAAGTAAAGCTAA
CTTGCTTTTTGAGATTATGCTAGTGGATGGGCTTCAACCAACAGTAGATGTTTATACTGC
ACTTGTAAATGCATATGGTCTTAGTGGCCTCCTTGATGAGGCGCTGCGAACTATTGATGA
TATGAAATCAGTTAGTAATTGCAAGCCTGATGTGTATACTTACTCGATCCTAATTAAATG
CTGCACTAAAGTTCGTCGTTTTGATATGATTGAATACATTTTGGCTGAGATGGTGTATTT
GGGAATTGAATGTAGTTCCGTGACATACAATACCATAATTGATGGCTATGGTAAAGCTAA
GCTGTTTGAGCAGATGGAAAGCTCCTTGACCGATATGATAGAAAATGAGACTGCCTTTCC
AGATGTTTTCACCTTGAATTCAGTAATTGGGTCCTATGGCAGCTGTGGGAAGCTTGAGAA
AATGGAGAAGTGGTTTGAAGAATTTCAGGTAATGGGAATAAAGCCAGATGTTATGACATT
TAACATTCTTATCAAGTCATATGGAAGAGCTGGCATGTACCAGAAAATGGAGTCTGTACT
TGATTTTATTAGGAATCGGTTCTATTCTCCAACAGTTGTGACTTACAATATCATCATTGA
GACATTGGGGAAAGCTTGCCTCATTAAGAACATGGAACAGTTTTTCCTACAGATGAAGCA
TGAAGGGGTGAAGCCAAGTTCATTCACTTATTGCTCTCTTGTAAGTGCTTATAGTAGAGC
TGGACTTATGGAAAATGTTGATTCAATCATGAGGCAAGTTGAGAATTCAGATGTAGTTCT
AGATACTCCTTTTTTCAATTGCATCATCAGTGCTTATGGTCAAGCTGGTGATATAGAGAG
GATGGTGGCATTATTCTTGGAAATGAAGGTCAGAAAATGTAAACCAGACTACATCACATT
TTCTACCATGATTCAGGCGTACAATTCACAAGGGATGACTGAAGCTGCAATGGACTTGAA
GACAAAAATAATTACTTCTTGTGGTACTTGTACTATTTAGCCTCTGTTTCTCCTGTCCAT
ATCATTTTTGCTTCATAAAGTATGAATCCTCTCAGAAATACAACTTTAACTTTATCAAAA
AAAAAAGTATGAATCCTCTCAGACTCACAGTTAGTAACATAAATCCAGCTATTTAGGTTA
GCTCTATCATATTTCTAGCTAAGTGCAGTTGATAATAAAAGGAAGTGTTATTCTCTAATA
AATCAGCTTTTATTTTTTGCTGTCATGTGTACTAAGTTACTCCCTCTGTCCCAATTTATG
TGACTTACTTTCCTTTTTAGTCAGTCCCAAAAAGAATGACACATTTCTATATAAAGTAAC
AATTTAACTATAAAATGTCAATTTTACCCTTAATGAAAATGATTTACAGCCACACAAATT
TCTATAATTCATTTTGGACTACAAGTTTTAAAAGTCTTCCTTTCTTTCTTAAACTCCGTA
CCGAGTCAAACTACCTCACATAAAATGGGACGGAGGGAGTATCATTCAATGAACTGCTTG
ATATCTGACACTTTGTTGTTACATTTTATTAGAATCAAACGAATTGATCAGCAGCTAGTA
CAATCTATCTGCTACCGAAGGAAACCATTCACTTGGAACTCTGTTCATCAATCTCAATGT
TGTGAAAGTGGGCAGAGTGTTATCTGCATGTGAGTTTAAGGATGCTATAGCAATCCGTTA
ATCAGATGGGATGGATCCAAGGAAAAGAACATAGTGAGTCTATTTGCGGCAATGTGATTT
CTCTTACATGTTTCTGTGAACTTTCGACGGCCTTAACCCACAACTAGAGAGATTTGCAGT
TTCCAAAAGCTCTTGTTAGGGAATAGTTTGGTTTAACTTCTCTGAGTAGCTTTACAGTTT
GTTTGCCTATGTATGTTATTTCTTGACTCGTTTTTTCTTGTATTAGCATATTTATATACA
GGTAAGAGAGGGAGGGAGCAGTTAAAGTTCTTCTGTTTACTATGTTCACGAAACAGCCAA
ACCGTGCTGTGATGTCTGTAGTGCAACCTGTGGGTTCATCTTCAGTTGAAAACCTCAGTG
ATGCTTGGGTGAATGAAGATTCTAACAGTAGTGGGTGATTATGATGGATAATTAACTCCT
CGGTAACATTGAGGATCTACACTATTTCAGCTGTCACTGTGGGGTTGTCTATTGCAGTAC
TAATAGTCATGCAGCAAGGCCTTTTTTTTTTTTTAACTAACCAGAGCTGAGTCACAACCA
TACATATGGGTTTTGAACAGGTCAGTGATGTAACAGGACTGACTTCTTTCGAAAGAGCAA
AGCCATGGGACAGATGGAGCATTATTAAGACACTTGCTGATTCTTCCTTCTAAATCGGGT
TGTTTTACCTCTTACTGGTTGCAAGTTTTTAGTAAACAGATATATAGAGCAATGTAGTGT
AAGATAGTTATACCATTTTCCAGCCCCTCGCCATTTCACATGTTACTGTGGAAATGAATT
ACAATATTATGTTTGATATACTACTTGAGCAGCAGGTGAACATTACTTATTTACTTTGCT
TTCTTAAAAGTGGATTAAAATGTCCAGACACCGTTTGACTTTCTGTAGAGCTGCAAGCAC
CGAACGACCTGTAGATGGACCTTATTGCAACACATACGTACAACCACTCCAATTTGTATA
GAGTTCTTCTCCTAAAAGCTTTCAACAGTGTCCTTCAAACTGATCTCTAGAAGAGTGAAA
TTTATGCCTAAGCTTTTTTCCCCTTCCTAAGACCGGGAAGGTGGCACCATAGGCAGCTCC
TCCTTATACCTACATCCCACATTCAAGAATTTGAGATGCCAAAATTCTCAAGATAGTAGA
TAACCTGAAC
