Microarray Probes on PGSC0003DMT400007478
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_13121_PI426222305 |
JHI_St_60k_v1 |
GAAAAGTGTCAATGTCCATTTTTTGGTCATTTTTTACTTCATTATCAAGGGATTGGGCTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400007478
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400007478 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G45616.1 |
+1 |
9e-86 |
300 |
202/504 (40%) |
receptor like protein 6 | chr1:17183550-17186534 REVERSE LENGTH=994 |
Transcript Sequence (3219 bp)
>PGSC0003DMT400007478 3219 pgsc_dm_v3.4
CTCTTTTTCATTTATTCACTTTTCTGTTGTGTATTTCTAAGTCTAAGTTTTTCTTCATCC
TTTGATCATCATCTTTGCTCTCCCAGTGAAGCTTCTGCTTTGCTTCAGTTTAAGCATTCC
TTTAATATATTGGACTTCTCCCCGTGTGATACGTCTTTCCCAAAAACAGTTTCATGGAAT
GAGAGTAACGATTGCTGCACTTGGGACGGGGTCACTTGTGACATGTTAAACGGTCATGTT
ATCGGGTTGGATCTTAGTTGTAGTCAGCTTAATGGAACTATTTATCCCAACAGCAGCCTC
ATCCAACTTCATCATCTTCAGACACTAAACCTTGCTAAGAACTACTTTTATCCTTCTACG
ATTCCAAATGACGTTAGCCGGTTGAGGAATTTGAAGCATCTCAACCTTTCTGATGCTTAC
TTTCAAGGGGAAATCCCAACAGAAATCTCATACCTTTCCAATTTGGTTTCACTTGATCTT
TCTGTTCCTTCTTATGTGAACGGATTACAATTTGATCAGAGAGCATTTAAAGCAGTGCTT
CAGAACTTGACAAATCTAGAGGTACTTTCTCTCTTTGGTGTCAACGTCTCATCTCCGATA
CCTGTAAATTTGTCTTCCTCCTTAAGGTACGTCGATCTTAAGGTAACAAATTTGGAAGGT
GTTCTCACGGAGAGCGTTTTCCTTCTGCCAAAATTGGAAACGCTCTATTTGAGTAATAAC
TATCTTCTCAAAGGAGTTTTACCAAAGATCCATCCAAGCAGCACATTGTTGGAGTTGGAT
ATTTCATACACAGGAATCTCCGGTGAGCTGCCTGATTCAATTGGCACCTTGAGTTCCTTG
ACTCGCTTGTACCTCTATGGATGTCAATTCTCTGGCCGCATTCCTGATTCCATTGGCAAT
CTTACACAAATTAGGTATTTGAATTTTGGTAATAATCATTTCACTGGCAATATTCCTTCC
ACAATCTCTAAATTGAAGCACCTCGCAGTTTTAGCTCTTTCATCTAACTCCTTCGGAGGT
GAAATTCCCAATTTTTTCTCTAACCTCCAAGAACTACGTTATTTAAGTCTTTCTAATTGC
AGCTTCATCGGTCCGTTTCCTTCTCCACTTTTAAGCTTGACACAACTTGAAACCTTAGAC
TTGTCGAGTAATTCCCTATCTGGACCACTGCCTAGAAATGCAAGCATGCTTCAAAAGCTA
GCCGAGCTGGATTTGTCTTACAACTCACTGAATGGTACCATACCATCTTGGGTGTTTAGC
CTACCTTTGCTATCTTCAGTGTCGCTCCATCATAACCGGTTAAGTGGTTCTTTTCCTCAA
TCACCTGTGAATCTCACAAACCTTTCTACCCTTGACCTTTCATCAAATAACATCACCCTT
GATGCAGGAATACAAATCACTTTACCTAGCCTAGTAGTTTTACAGTTATCATCTTGTGAA
CTTAGGGATTTTCCACACTTCTTGAGAAATGTAAAGACACTTATGGTCTTGGATATTTCT
AACAATAAGATTCGTGGTCAAATCCCTAACTGGTTTAGCGGCATGAGGTGGGACTCCTTG
TTGCACCTAAACCTTTCACATAACTCATTAACAGGCCACCTACAGCCAGTGGCGGAGGCA
GCATGTAATGAGGGGGGGCACCCCCCTCGGCGAAAAATATTACTATTTATACATGGTTAA
AATTATTTTTTAGGTATGTATAATAGATGTCGAACCCCCTTCCACTAGTTCGTGTGTTTA
CTTTTCAGATTTTGAACCCCCTTATTAAATTTTCTGGCTCCGCCACTGCCTACAGCAACT
TCATTATAATAGTCTAGAGTCTCTTGATCTTAAATTTAACTTCCTTGAGGGGGCACTACC
TTCATCCATTTGTAACATGAGCAGTCTTAGCCTTCTGGATTTGTCACACAACTACTTCAG
TGACTCGGCTCCGCATTGCTTGGGCAGCATGGTTGGGCTATCTGTGCTAGACTTGAGAAG
AAATAGTTTCACTGGGAGTCTTCCACCGTTTTGTGCGCAGAGCAATTCATTGAGAACCAT
TGTCTTGAATGGTAATCATTTTGAAGGAACTGTCCCGATGTCATTGCTCAAGTGTGATGG
TCTAGAAGTCCTTGATGTGGGGAACAATGTTATAAATGACACGTTTCCAGCTTGGCTCGG
AACTCTTCAAGAGCTGCAGGTACTTATATTGAAGTCTAACAAGTTCCATGGACCTATAAG
TACTAGGCTGAAGTTTGGTTTCCCCGTGTTACGGATTTTTGATCTCTCTCATAATGAGTT
TGGTGGTTCACTGCCTGCAGAAGTTTTTGAAAACTTCAAAGGAATGATCAAAACAGATGA
GAGAGACAAAGGAGAGATCGAATATATGCAACCACAGTCTTACATCGGATTTAGTAACGT
AATGTATGAGGTTTCAGTGAGGTTGGTGATCAAAAGCCAGGAAATTCAGCTAGAAAAAAT
CACCACAATTATGACAACCATAGATCTCTCAAGCAACCATTTTGAAGGTGTCATTCCGAA
AACACTAAAGGATCTCAACTCACTTTGGCTACTCAATTTATCTCATAACAATCTCAAAGG
AGATGTACCAATGGAACTGGAGAAATTGAATATGCTTGAAGCGTTAGATCTCTCTTGGAA
TCGGCTCACTGGAAAGATTCCACAGCAATTGACAAGAATGAACTTTCTGTCATTCTTAAA
CCTCTCTCAAAATCTCCTTGTTGGACGCATTCCTCAAGGTTCACAATTCAACACATTTGA
AAATGATTCATATGGTGGCAACCTTGATTTATGTGGTCCTCCTTTATCAAAGAAATGTGG
AACAAGTGATCCATCACATGTTCCTCAACCATTGGAGGAAGAAGAAGAAGATGATGAGTC
ATATTTTTTTAGTGGATTTACATGGGAATCAGTAGTCATAGGCTACAGTTTTGGACTCGT
TGTTGGAACTGTCCTGTGGAGTCTCATGTTTAAATATCGTAAGCCAAAATGGTTTGTGGA
ATTTTTTGACGGCATCTTTCCCAAGAAAATGAGAAGGCCAAAGAAGAGAGCTCAGAGACG
ACGGACATAATGAAAGATTGAAAGCAGTTCCTTTAACTGTTTGTATATATGCAGTATAAT
TGTATGTGTTGTTTTAGCATTTAGCTATTGAAAAGTGTCAATGTCCATTTTTTGGTCATT
TTTTACTTCATTATCAAGGGATTGGGCTGAAAATTTGCA
