Microarray Probes on PGSC0003DMT400007376
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_11051_PI426222305 |
JHI_St_60k_v1 |
GAGAATGAGAGCTTGAGAAATGAGGTACATTTACTCAAAGATAAGTTGATCAACAGCGTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400007376
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400007376 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G01470.1 |
+1 |
2e-40 |
149 |
97/214 (45%) |
homeobox 1 | chr3:182648-184034 REVERSE LENGTH=272 |
Transcript Sequence (1571 bp)
>PGSC0003DMT400007376 1571 pgsc_dm_v3.4
TCTTCTTACCCTCAAAAAATCTCCCTTCCATATTTTCCTCTATATTTTCTCTTTCTCTAT
GCTGAGTTTTCATCTTCCTTGTCTACTTCTACTTCTTTTTTTCAATATTAATTGTGATCC
TCATTTATAGTACTTATCACAACTTTCTTACTAACAATTCAATAGTCCAATTTTTCACTT
CTTGATTCTCCTCTAAACTCCTAGTACCAAAAAAATTTAGAAGATAGTATGGAGGTAGCA
AGAGTTTATGAAGGTTCTAACAATTGCTTTATACCTCCAAATGAAATTCTTCCTCCTACT
TCTAATTGGGTATCTAACTCTTCCTCCATTTTCCATGGCTCTGTATCCATGGTAAATTTC
GACCAAGATCAAGTACAAAAGTCTAAAATGAGGTCATTTTTAGTACAACTTGATCAAGAC
GATAATAACAGCAACGATGACAATTACAATTATCACCAAAGTGAAAAGAAGAGACGATTG
TTACCAAAGCAAGTTGAGTTTCTTGAGAAAAGTTTCGAGGTAGAAAACAAGCTTGAACCT
GAAAGGAAAGTACAATTAGCTAAAGAAACTGGATTGCAGCCTAGGCAAGTTGCTATTTGG
TTTCAAAATCGACGTGCCCGGTGCAAGACTAAACAACTTGAGAAGAATTATGATGTCCTT
AAAGCTAGCTTTGATAAACTAAAGACTCAATATGATTGTCTCTTCAAAGAGAATGAGAGC
TTGAGAAATGAGGTACATTTACTCAAAGATAAGTTGATCAACAGCGTAAAAGGGAAGGAA
ACTTCAGAACCTATTAATCCACTTGATCATGTAGAACCTCAAAATCCTTCTATTGGAGTT
GCTTCAAATTTAGCAATGGTGGTGTGCAAGCAAGAAGATACAAAAAGTGATGTTCTTGAT
TCAGACAGCCCGCGTTTTACTGACGGCGATTACACTTCATTTTTGGAGCCTGCTGATTCT
TCAAATGTATTTCAGACAGAACACTCTGATTTTTCTCAAGAAAATGACACATTATGCTTC
CCAAAACTTGAAGAAGATCATCATCATGATGATTTACCTGTTAATTCTTGTCATTTGGGT
TTTCAAATTGAGGATCAATCTTGGTTCTCACATTATTGAGTTTTCACTTCAAGATCATAT
AAAGGGAAATGAAGCCTTTGTGCTACATTTCCTTTTTTAATTTACACCAATAATATGTTG
TATGTATTGTATAGGTCCATTTGGAATGAGATGAAGATCTTTGTTGAACCATTCAGTGTC
CACATTGCAGGGTTAATTCAGGGGTGATGCTCTCAACAGGGTTTTCTCGATACCTCATAA
ATGATAGATTGATATTTTATACACCCTTAACTCTTTTATGGACCAGGTTAAGCTATGTGT
TTTACTATAATAACTTAGTTGAAATCAATGCAAATAATAATAAGAACACAATATTTTTAC
GTGAAAACATCCAACTCATAAGGGTGGAAAAAAATCACGACCTACATCTTTGTAGGATTT
CTCCTAATCTTTACTGATTAATGAGCTTCGACAGAATTTAGATTACCACACTTGCAATCT
CGGAACTGACT
