Microarray Probes on PGSC0003DMT400006610
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_9294_PI426222305 |
JHI_St_60k_v1 |
GCAGATCAAAGATCTTACTTATCCTGGACAAGTATATTGAGATTTCGAAGAAAGAGTAGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400006610
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400006610 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G72770.1 |
+3 |
2e-164 |
496 |
272/503 (54%) |
HYPERSENSITIVE TO ABA1 | chr1:27390998-27392851 FORWARD LENGTH=511 |
Transcript Sequence (2992 bp)
>PGSC0003DMT400006610 2992 pgsc_dm_v3.4
GGCTGACCTGCCAAGAAAGGACACGTGTTGTTCTTGAAAATGGTCCTCATGGAAAGTCCA
TGAACTCCCTTTTGTTTTTTTGTAATTAAGGGTAAGCGCAAAACAATTCAAAGCATTTCT
CTGTCTGCTAGCATTGATTGGAGTTAGATAATTGAATCTACACGTGTCTTCTAAGGAGTC
AGTGCATCAAAGGTAAAATCTTTTCTACATCCCAAGTTGTATTTTCTCTCTCATGTGTCT
CACAAAGAAAAAAAATAAAATCTTGAAAAGGGGCTGTAGAGGGAGAGTCTGCAAGGTGTT
TTGGTAAAAGGGTTTTTGTTGATCCTGCATCTTTGTTGCATGCTGAGTCAAATACCAGTT
GGAATGGAAATAGCAACGGTATGAAAGTTGGCGTTGGTAGGATTCCCTTGTTGACACTAG
GAGAAAGCTCTGGAAAATGTAGTCTGCCGCAGACTCTATTGGGAGCTGAAAACGGCCTGA
TTGTTAGCGATAGCATCATTCAGGGAAGTGATGAAGATGAGATTTTATCTGTTGGAGAGG
ATCCATGTGGAATTAATGGCGAGGAGTTGTTGCCACTGGGAACTAGCTTACAGTTGAGCT
TGCCAATTGCTGTTGAAATCGAGGGTATTAACAATGGACAAATAGTTGCCAAGGTCATAA
GTTTGGAAGAAAGGAGTTTTGATAGAAAGGTTAGTAATACCATAGTTGCTCTCCCAGATG
ATGAAATTACTAGTGGCCCTACACTAAAGGCATCTGTAGTGGCCCTTCCATTGCCCAGTG
AGAAGGAGCCTGTCAAAGAAAGTGTCAAGAGTGTGTTTGAATTGGAATGTGTGCCACTCT
GGGGTTCTGTATCTATCTGTGGAAAGAGACCGGAGATGGAGGATGCTCTTATGGCTGTTC
CTAATTTTATGAAAATTCCTATCAAGATGTTTATTGGTGATCGTGTTATTGATGGACTAA
GTCAAAGTTTGAGTCACCTGACATCTCATTTCTACGGAGTATATGATGGTCATGGAGGAT
CTCAGGTTGCAGATTATTGCTGTAAACGTGTTCATCTAGCATTAGTTGAGGAGTTAAAAC
TTCCCAAACATGATTTGGTGGATGGAAGTGTAAGGGATACCCGGCAGGTTCAGTGGGAGA
AGGTCTTTACTAATTGCTTTCTCAAGGTTGATGATGAAGTTGGAGGAAAGGTGAACATAG
ATCTCTGTGATGACAACATGAATACCTCTAGCTGCACCTCTGAGCCTATTGCCCCAGAAA
CTGTTGGGTCCACTGCGGTTGTAGCGGTGATTTGTTCATCTCATATTATAGTTGCTAACT
GTGGGGATTCAAGAGCAGTCCTTTATCGTGGCAAAGAAGCGGTGGCATTGTCAATCGATC
ACAAACCAAGCAGAGAAGATGAGTATGCCAGAATTGAAGCATCTGGTGGTAAGGTCATTC
AGTGGAATGGGCATCGTGTATTTGGTGTTCTTGCAATGTCAAGATCTATTGGTGACAGAT
ATTTGAAACCATGGATTATACCCGAACCAGAAGTTATGTTTGTACCACGTGCTAGAGAAG
ATGAATGCCTAGTTTTAGCCAGTGACGGATTGTGGGATGTGATGACAAACGAGGAAGCTT
GTGAAGTGGCTAGACGACGAATTCTGCTGTGGCACAAAAAGAATGGGACTAACTCTCTGC
CGGAAAGGGGCCAGGGAGTGGATCCTGCTGCACAAGCAGCGGCAGAGTATCTTTCATCGA
TGGCTCTTCAAAAAGGTAGCAAAGACAATATATCTGTGATTGTGGTGGACCTTAAAGCTC
ACAGGAAATTCAAAAGCAAAAGTTAGAGATTACATGTTCTCACCCACATTTGGTTTAGTA
TAAATCTGTACACGGCGACGGGTATAAATCTCATTATTACATAACTCAGTCCATTCATTT
TTCCTATGGGCTTAAGGTGTGTATGAGAATAGTATTTTAGCAATGTATTATAGAAAAAAA
CAGTTAACAAACGACGTTTATCCAAATTTTTTGGTGTTTGTTGCGCCAGAAAATGGCTAT
GTAAATTGAGCATGTTGAAGCAATATCAGAGGTGCAATTTCTTAATTCTTCCGTTCAGTA
TAAAAGCAAAGACATTATTGGTTACTTGATAAGTTATGCACATTGCGGGTCTCATGAGGA
TCTATGAGGTTGAAGGGCAATTCGATTCATTAAGGGGGCATAGTGCTGCTGTGGTTTCGG
ACTTAGCAAGGTCTAAGGGCCATTCGATTCATTAAGGGGCGTAGTGGTGCTCTCAAGCGG
TTTCGGACCTAGCAGCATACAAGTGGGTGATGCTCTCAAGCGGTTTCGGACCTAGCAGCA
TACAAGTGGGTGATGCTCTCAAGCGGTTTCGGACCTAGCAGCATACAAGTGGGTGATGCT
CTCAAGCGGTTTCGGACCTAGCAGCATACAAGTGGGTGATGCTCTCAAGCGGTTTCGGAC
CTAGCAGCATACAAGTGGGTGATGCTCTCAAGCGGTTTCGGACCTAGCAGCATACAAGTG
GGTGATGCTCTCAAGCGGTTTCGGACCTAGCAGCATACAAGTGGGTGATGAATTGAATTA
GCTAATGAATCTTTCGTAATGCTTGCAAAGAAATCAGAAGAAAGGCTTCTGCCCCTTGGT
GTTTCGGAACGAATGGGAAGAAGGAATCAGAAATGAACTTATATAAGAGCGCTTATTCCG
CTTCCTTCTACTCTTGAAAGGTGATGCCTAAATTGACAACGGATTAAACTCTGCTGAGGA
ATTCTTTTATTTGTCCTGGACAAGTACGTAGAAGCTTGGGCTGCTTTAACCGTTTAGCCA
TGCAGATCAAAGATCTTACTTATCCTGGACAAGTATATTGAGATTTCGAAGAAAGAGTAG
AAAAAAACATAGCAAGGGAAGTGTGAGGAGGGAGAGAGAATTTAACGTGTTAAAACAAAC
CATGTAACATAAATATGGAATCCAATTATCAATGGTTAAATCATCACTTGTA
