Microarray Probes on PGSC0003DMT400005893
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_46438_PI426222305 |
JHI_St_60k_v1 |
GAAGATATTCCTTCACCTACTAGCAGGGAAGAAAATACTTATGGTTTTTGAATCCTTATG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400005893
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400005893 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G30370.1 |
+2 |
2e-177 |
514 |
270/488 (55%) |
alpha/beta-Hydrolases superfamily protein | chr1:10719169-10720758 REVERSE LENGTH=529 |
Transcript Sequence (1579 bp)
>PGSC0003DMT400005893 1579 pgsc_dm_v3.4
TCAAGTTCCAACTCAAATTCTCATTTACAACTTCTCCATATTTTTTCAAGCCACCATGAA
ATCAATCCACCTCCCCCTCGTCACACATCTCCACCATCACAACCTTGACCTAACTAAAAA
TAGGGTTCCCATGGTCTATGCCTACCAAGATGTTGTTAAAACCTCAAAGAAATCAAATAG
GCTTGGTGAAAAATTGTCAAACCTTTTAAACATTCAAAAGAATGATCCTCCTCCTAGTAC
TCATTCTACTTTGAACAATATTCATGAAGACAAGGCCAACACACCTACCATGTCACCTAA
GGAGGACATATCCGATCGATGGCGCGACATTCATGGTGTTCATGAATGGGAAGGACTTCT
TGATCCACTCCACCCTTTGCTTCGTCGAGAAATTGTAAAATATGGTGAATTTGCTCAAGC
AACTTATGATGCATTAGATATTGACTCATTCTCTGAGTATTGTGGAAGTTGCATGTACAA
TAGTCATAAATTGTTTGATAAGTCAGGACTTAACAAGAGTGGCTACAAAGTTACAAAGTA
CATCTATGCTATGTCACAAATAGATATGCCCCAATGGCTTGAAAGATCAAAATTGACATA
CACATGGAGCAAAGATTCAAATTGGATTGGTTTTGTGGCAGTTAGTGATGATGAAGAATC
GCGCCGAATTGGGAGGAGAGATATTGTTGTGGCATGGAGAGGCACAGTGACACCTTCAGA
ATGGTATGAAAATATGCAGAGGAAATTAGAGTCAATTGGACATATGGACTCAAAAGTAGA
ACATGGTTTTCTTAGTATTTACACATCTAAGTGTGATTCAACTAGATACAACATATCAAG
TGCCTCAGAACAAGTCATGAAAGAATTGAAAACATTGGTAGATTTTTACAAAACAGAAAG
TGCTGAACAAGTTAGCCTCACAATAACAGGACATAGCCTAGGGGGTGCACTTGCTCTACT
AAATGCTTATGAATCAGCAGCAAATTTTCCAAAACTTCCAATTAGTGTTATTTCTTTTGC
AGCCCCAAGAGTTGGAAATATTGCATTTCGCGATGAGCTTTATCAAATGGGAGTCAAAAT
TTTACGTGTTACAGTGAAACAGGACTTAGTCCCTCGAATGCCCGGAATAGTTTTGAATGA
AAGTCTACAAAAATTCGATGATCTTACTGGGACATTAGAGTGGATTTACACACATGTTGG
TGCTGAATTGAAGCTTGATGTTAGGTCTTCACCTTATCTTAAAAGGGGGTTCAATTTTAT
AGGGATTCATATGCTTGAGACATACCTTCATTTAGTAGATGGTTTTGTGAGTAGTAGTTC
AACATTTAGGTCTAATGCTAAAAGGGATGTGGCACTGGTGAACAAGGCATGTGATATGCT
TGTAGATGAGTTAAGAATTCCTACTTGTTGGTACCAATTGGCCCACAAGGGGTTAGAGTG
TAATTCTTATGGTAGATGGGTAAGGCCCAAAAGAGATCCAGAAGATATTCCTTCACCTAC
TAGCAGGGAAGAAAATACTTATGGTTTTTGAATCCTTATGTATACATATTCTAATATATT
AGAAGAATGAGTTAAAAAT
