Microarray Probes on PGSC0003DMT400005823
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_35448_PI426222305 |
JHI_St_60k_v1 |
CTGTCAAGCCAGTTAGCATCATAATCTGTATTGTCTTGTGTATATGTGTAATCTATAGGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400005823
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400005823 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G47240.1 |
+1 |
3e-25 |
105 |
65/140 (46%) |
nudix hydrolase homolog 8 | chr5:19183806-19185467 FORWARD LENGTH=369 |
Transcript Sequence (1118 bp)
>PGSC0003DMT400005823 1118 pgsc_dm_v3.4
TTTTTGTGTCAAACTCAGTCCGAGGAGATTTTTACAGGAATTGTAAGAGAAGTGCAGGAG
GAAACTGGGGTAAGAAATTCACTTAAATGTATCGCCATCCTAAACTAGCAACCTTAACGA
CAAATCGTTATTTAAATGATCTCATTACGTTTTCCAGATTGATACTGAATTTGTGGAGGT
TATGGCTTTCAGGTAACAAAATTCTCCCTCTTCAAAGAACCATGAGTTTATCTTATATAT
TACACCTTTTTATCGATAGGAAGTGCTGTATTAGAAATCTTATAAGAACACAAAATGCTG
ATACCATAAGTATCCGAACAACTTGGCTCAGAGACAGAGAATGTGGAGTTGCTATTCGCT
AGATTTCACTGTCTCCTTTAGGATATTTCAAGCTTTATTCAGCTTCTTGCTCTATCTCAT
GCTATGTACATTAGTTTTGGACTCTAATTGTTGATTTTACAGTTTACAAACAAGATACCA
TTGTTTAAATTAACATTTATCATGTCCTTCTTCAGGCATGTTCATGATGTGGCCTTTCAA
AAGTCAGATTTGTTCTTTGTCTGCCTGTTAAGACCCCTGTCAAAACAGATCATGGTTGAT
GATGTAGAAATTCAGGATGCTAAGGTAAGCATATCGTATTGGGTAATACTCACCTGATGA
GCTAGCGTTTGAGGTTGAGTTAGACTTTAAGTCTGCAGCTTTATGCGACTTAGCATTTAC
TCGAGCTACCTTATCTTTTTTGCAATGCAGTGGATGCCTCTAGTTGAGTTTGTGGAGCAA
CCTCTAATCCAAGAAGACGACATGTTCAAGAAAATAATTGACATTTTCATCGCTAGACTA
GGGAAGCGGTACTGCGGATTGTCTGTCCATCAACTGGTTTCCAAATTTGATGACAAACTT
TCTACATTGTACTTTAACACAGTTGATGATCCAAATTTGAACTGTCAAGCCAGTTAGCAT
CATAATCTGTATTGTCTTGTGTATATGTGTAATCTATAGGTTATGGATTCTGTAAATATA
CTTAAAAATTATTCAAAAGAACTTGTTACAGGGAGGTAACTGTCATATGATTTTCTTTCT
TTATAATTTGTATATTAGGTTTTTGTATCGGATGTTTG
