Microarray Probes on PGSC0003DMT400005622
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_30029_PI426222305 |
JHI_St_60k_v1 |
AAATATCTTCTTTGTAATGGTTACTGTGAGAAGTTTTGAATCCATCTGTACATGCTGGAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400005622
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400005622 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G56750.1 |
+1 |
4e-135 |
372 |
190/259 (73%) |
N-MYC downregulated-like 1 | chr5:22957986-22960606 FORWARD LENGTH=346 |
Transcript Sequence (1478 bp)
>PGSC0003DMT400005622 1478 pgsc_dm_v3.4
TTCCAATGCTTCTTCAAATCAAAGTGAAGAGAAAGAGAGAGAGAGAGAGAGGTTTAGAGA
GAGAAAAAAGAGGGAGTTTTAGAGAGAGAAAGTAAAAGAGAGAGAAGTGCGGCTAATGGG
AGATTCGAGCGACTCCGTTTCGGTGGATATGGAAACAATCTCCGTCGCCGGAAAGGAGCA
CCTTGTAAAAACTGGCCGTGGTTATGTCTCTGTTGCTGTTTTTGGGGACCAGGACAAGCC
GGCTCTTATCACCTATCCCGATTTAGCTTTAAATTATATGTCCTGTTTCCAAGGAGTATT
CTATTGTCCAGAAGCATTTTCATTGCTGCTCCATAACTTCTGTATTTACCACATAAGTCC
TCCTGGTCATGAGAGTTTTTGCAGTTGGGAGCTGCTGTCATGAGTCTTGATGATCCTGTC
TTATCGGTTGATGATTTAGCAGACCAGATTGTGGAGGTGCTTGATTACTTCAGGCTTGGT
AAAGTAATGTGTATGGGTGTAACAGCTGGAGCATATATTCTTACTTTGTTTGCGATAAAA
TACACACAAAGGGTTATGGGTTTGATACTCGTTTCCCCCTTGTGCAAAGCACCCTCTTGG
ACAGAATGGTTGTGTAATAAGGTGATGACAAATCTGCTTTACTTTTGTGGCATGTGTACT
TTGGTGAAGGAGTTACTGCTGTTGCGGTACTTTAGCAAGGAAGTCCGCGGCAGTGTTGAA
GTTCCAGAATCGGATGTAGTTCAAGCATGCCGAAGATTGCTAGGTGAGAGACAGAGTCCA
AATGTATTGCGGTTGCTCGAAGCTATCAATGAGAGACCAGACATAACCCAAGGCTTGCGG
AAACTAAAATGTCGTTCTTTAATATTTGTTGGAGAGAGCTCTCCTTTTCATTCCGAGGCT
CTCCATATGACATCAAAGTTAGATAGAAGGTTCAGCGCTCTAGTTGAGGTTCAAGCATGT
GGTTCAATGGTGACTGAAGAGCAGCCAGATGCAATGTTGATCCCACTGGAATACTTTCTA
ATGGGATTTGGATTTTATCGACCGTCTCAGTGCAATGTCAGCCCAAGAAGCCCGTTAAGT
CCAACCAGCATCTCTCCGGAGCTTTTCTCGCCAGAAAGTATGGGGTTGAAGTTAAAACCA
ATTAAAACCAGATTTTCTGAAGAAGTATGAGTCTGGGCTCAAAGTTAAAATAAGTTTTTG
TAAAATTTGTAAGCATACATTGAAGATCCACTTTGATTGAAGACAGTTAGGAATGTGAAT
TTATAGGAGGGAGGGAGGGTTGTAGATAAGAGAGTTGGAAAATAGAAAGTGGAAGAAAAA
ACAAAAGGAAAAAAGAGTTTTTTTTTTAAAAATATCTTCTTTGTAATGGTTACTGTGAGA
AGTTTTGAATCCATCTGTACATGCTGGACAATAAATAATAGTAATTTATATTGATAAAAG
GAATAAAAATAATAAAAAGGCAGGTGCCAGCCTTTTCC
