Microarray Probes on PGSC0003DMT400005528
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_51605_PI426222305 |
JHI_St_60k_v1 |
CAAACTCATGACGTACGCATAATGTTAATGTTCTTATTCGCGTATGATGAATCTCATTCT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400005528
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400005528 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G02020.1 |
+2 |
2e-22 |
95 |
50/102 (49%) |
Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich). | chr5:386557-387921 REVERSE LENGTH=149 |
Transcript Sequence (1572 bp)
>PGSC0003DMT400005528 1572 pgsc_dm_v3.4
ATTTTATTTTATTTTATTTTGTTGTTGAAGAAGAAAAAATAAAATTAAAAAAAATAAAAT
GGAAGGAACAAAAAAAACTAGCAGTTCTTCATTTACTTCTGATCTTTTTGGTTCTAAAGA
AACTTCAGCTTCTTCATCTTCTTCAATTTTTGGTTCCATTTTCCCTCCTTCCAAGGGACA
TGGATCGATGAATTCGGAGCAATTGAAGCATGATCCTGTGATTCAGGATAGAAATGCTAA
AGGTGGATACTCAGGAAGTACTCCTACTAGCAATGAAGCTTCCAGCCAGCAGGCTGCACA
AAACAAGCAGCCGAGTTCATTTTATCAGAACGAAAAAGTACAGCCATGCCATCTTAGCTC
ATCGATATACTACGGGGGCCAAGATGTCTATTCATTTCCCCAAAATAATAATCAGAGCTC
TACATACACAACTTTCAGCAAAGATAATGGAGAAGATGATTCTGGCAGTGCGTCTCGAGG
AAACTGGTGGCAAGGTATGTAGTTTTGATTATTTTTTAGGGTCTTTTGGCACACAGTTCG
AAACTCAGTGGATAATAGGCGCGTCTGTCTACCTTTTTTCACTCAAACATAACTTCCGTC
CGCGTAGAGTTCAAACTCATGACGTACGCATAATGTTAATGTTCTTATTCGCGTATGATG
AATCTCATTCTTATTATTTATTAACAATACATGGTTTTTAATTTTGCAGGGTCTCTTTAC
TACTAGAGCTCACCACCAATGACATGGATGTTACATATTTTCAAAGGTATACAAAAGACT
TGGTTATGTTTATCTTATTCTTGATAGTAAGTTCCTTTGGTTTTTGCTATCTCTCTTTAA
TAAAAGACCAGTCTGGTGCACAAAGTATCCTCGTTCGCAATTGCTTACCTAATTTTTAGG
TCTTGTAGGCATTTGCTTGTTGATTCTAATCTTACCTTAAATTCCATGCAACTTTTATTT
TGATTTTATTTATGCTTGAAACATACTACTAATATTGATTTATCTTCTTATCATTTTGCA
CCTATCATGTTATATGTTCTTTTTGTTGAATTTTTTCTGTCTTGTGGCAGGAAGTTAAAG
ATATAGAGAAGCAGTTATCTACCTCAAATATTAAAGATGGATGATTACTAGTAATTAGCC
AAAGAGACCAGTAGTTGGTTGAACACTACAGATTATAATTATAATAATATTAGTATATGT
AATTGGTAGTTAATTAGTCTTTTTCTGTTACATGTAAAGGATTATAGACCTTATGCACTT
TGCTTTATAATGTGAAGACAATGTTTAGGAACTAGCTTACAACTTTTGTGCCTATGGACT
TTTTTTTGTTTGGGTAAAAGAGTTTCTTTACTCCTTTAAATTTGTGTCAAGTTTAATTCC
AAACAACAACAATATGTTCAGTGTAATCTCATAAGTGGAATTTAGGTCTCATTGACTTGA
GCGGATCGATGTATCTTCACTTTATATGGCTGTATTGTCTCACCCCGTTTCCCTTATCTT
GTCCACAATGGAGGTTGTCACCTTCATGTCCTAAGTAGCTTCATTCTTAACCCTAACACT
TTTAGTATGCCT
