Microarray Probes on PGSC0003DMT400004379
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_41126_PI426222305 |
JHI_St_60k_v1 |
GTTTCTGTGTTTGATGACTAATTTGACAGAAAGTTGATCTTAACATCTCCAGTGATGCTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400004379
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400004379 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G09690.1 |
+1 |
0.0 |
615 |
289/505 (57%) |
alpha/beta-Hydrolases superfamily protein | chr3:2972356-2974592 FORWARD LENGTH=527 |
Transcript Sequence (2460 bp)
>PGSC0003DMT400004379 2460 pgsc_dm_v3.4
TAAAAAGTGAAATATATTTCACAAATACTATGGCCAAACACATGATGAAATTTCACCCAA
ATTTTCACCCAAATAATATTTGCCAAGAATATTTGGAAATCTATGGCCAAACGCTAGCTA
AGTGAGCAGATCACTATCTCCTTTATACAATATTCTCTCTCCACTGTCCCTTTTCCGGCC
ACCGTGCACCGCCACTCTCCTCCGCGAAGTCCCCGGAACACAGCGGCTATCTTCCTTCAT
TTCTCACTCTATCAGTAAAATCCTACTTATAGTTTTACTAACACTAAAATAGATAGTCAA
CAGTTACCGGAAAACTCGAATTTTATGTTCATATTTGCTTCGTAATGTGTGTTTGTAAGT
GTAGACAGCTCAACTGAAAACTCTTGTAGCTGGTGGAATCTATAGGTGAAGCACGTGTGA
TGAAGCATTTAGGTGAAAAAACGATGAACTACAGCTAATCAACTAGATATTTTTTTTTTT
TCTAATCAACTAGATATATATTGAGAGATAAGACATACGATGGCGGATGTTGCAGTTGCG
AAGTCATGGAGAGACGAGCTAGCGAGTTTAGTGGAGGATAGTGGGATAAGGTTTGCCGGA
GATGCTGTAGAAATCTCTGCTCCGACGTATTCTACGCCGGCGTTTGAGGAGAAGAGATCG
GTGTATGAGTCGCCGGCGATTGAGGAGGTTGTAGCGGAGCCGGAGAGTTTTAAGGACCAA
ATCGAAGGTTTCGCGAAGGCCTGGGGAGAAATGTTGCTGGAATTGATGAGAGGTTGTAGA
GATGTGGTGCAACAAAGCTTGTTGACTGAGGAATCTTACATTGTGCAGAAAACTAAGGGT
CCTTTAGCTGAAGCTTCCAGGAGGTTGAGTGTTTTGAACGAGTTTTTGCCGGAAGATCGT
GATCCAGTGCATGCTTGGCCGGTGATTTTCTTCGTCTTCATCCTCGCCCTGTCCGCATTG
AGTGTAAATAGTAAACAAGAAACCTCAGGCAAGCCAGTGAAAGAAGTGCACATACATCCT
CCTAGTGCTACTCGTATACTGCTTCCAGACGGCAGACATATGGCATACCAGGAGATAGGA
GTTCCATCAAACAAAGCTAGATATTCTGTAATTGCTCCACATGGCTTCCTCTCTTCTCGA
CTTGGAGGTATACCTGGAGTGAAAGTATCACTTCTTGAAGAGTTTGGCATTCGTTTGGTA
ACTTATGACCTTCCAGGTTTTGGAGAGAGTGATTCACACCCTGAGCGGAACCTTAACTCA
TCTGCTCTGGACATGCAATACTTGGCTGATGCCTTAGGAGTTAATAGTAAATTCTGGGTT
TTGGGCTACTCAAGTGGAGCAATACATGCTTGGGCTGCAATGAAATTTATATCTGACCGA
GTTGCTGGTGTAGCTATGTTTTCCCCATTTATCAACCCATATGAATCAAGCATGACCAAA
GAAGAGACGAGAGAAACTTGGAACAAGTGGACAAGGAAAAGGAAATTGACATACTACTTA
GCTCGAAGATCTCCAAAATTTCTTGATTACTTCTATCACCGGACATTTCTATCTGGAAAG
CATGGTCAAATTGATAAATACATGTCTCTGTCGCTGGGACAAAAGGATAAAGCGCTGATC
AGAGAACCAGCCTTTGAAGAGTTTTGGCACAGGGATGTTGAGGAATCAATACGTCAGGGC
AGCACTAAGCCATTTATAGAGGAAGCTTCACTTCAGGTGTCAAATTGGGGGTTTAACCTT
GTGGATCTTCAAGTGCAAGAAAAGTGTTCTGGTAAAGGGATTCTATCATGGCTTAAGTTT
GGTTATGGTCAAGTGAGGTGCGAATTGACTGGATTTCTAGGACCAGTTCACATATGGCAG
GGATTGGATGATCAGGTTGTACCACACCAAATGACCGACTATGTAGCTAGAATTCTGCCA
AGAGTGGTGGTGCACAAGCTTCCTGATGAGGGCCACTTTTCCTATTTCTTCTTCTGTGAC
GAATGCCATAGACAAATGTTCCTGACCATTTTCGGAAGCCCTCAGGGGCTTCTTGAAGAG
AGCATTGAAGCTCCAACGGAAGAAGATGGAGAACAGGAAGCTGCAAATCTCAATTTGGCA
GCAGAATGAGCAGAAAAGGTTTCGTCATCACTAACTACTGATGTATATACCATACGAATG
CTCCGTTTCTCCAGGAGCACAAAAGATCAGATGTACGAGCAGTCCTAATGGGCTCCAAAT
ATTTTTCTTTTTTTTGTTTTGGGTGGATAGTGCTTTTCGGATTTCACTACGAATTGTAAC
AGAAGTGAGTAACAGTTGATCACAGGAATCTCTTCTTTTTTTTTCCCCTAAGAGGGCATA
TCTTTGCCTTGTTTGTTACAAGTTTCTGTGTTTGATGACTAATTTGACAGAAAGTTGATC
TTAACATCTCCAGTGATGCTTATTTTCTAAATTTCTGATGTAAATTTCATTGTATCAGCG
