Microarray Probes on PGSC0003DMT400003939
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_5034_PI426222305 |
JHI_St_60k_v1 |
GTTGTTGTTGAAATCTATTATTGTTTCCAGTCATGTTCTTGGAGCATATGCTAGTTTCCT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400003939
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400003939 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G04530.1 |
+2 |
8e-24 |
101 |
72/181 (40%) |
Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:1234456-1235895 REVERSE LENGTH=310 |
Transcript Sequence (1476 bp)
>PGSC0003DMT400003939 1476 pgsc_dm_v3.4
AGCTGAGGGTCTACGGAAACAGCCTCTCTATCCCACCAAGGTGGGGGTAAGGTTTGGGTA
CATCTTACCCTGCCCAAACCCCACTTGTAGAATTACACCGGATATGTTGTTTTTTTGGTA
ATAACATGTGAAACCGGATATGATGTTGTTGTTGAAATCTATTATTGTTTCCAGTCATGT
TCTTGGAGCATATGCTAGTTTCCTCTGGGACATCAATGACGATGAAAGTGAGGATGAAAT
GAACACACAGAGTGATAAGACTAAGATTGAGGAAAGTGGGGAAGCTACTGTATCCCGGAA
CTTAGATTACGAAGAAGCTAACAGACCTGTTAGTCCTCCCTTACATCTTGCAGCAGGATT
AGGAATTGGGGTTAATCTAGTTGGTGGTGGCTCTCCTGTTGATTATACTGCAGCTGTATC
TGATATGGACAGAAATGCCGAGGAGGAGTACATGAGAATGATCAAAGAAAATCCTCATAA
CCCCGTGCTTTTAAGAAACTATGCTCAGTTTCTTAGTCAGTCTAAGGGAGACCTACTAGG
TGCTGAAGAATATTACTCACGCGCAATACTAGCGGATCCTACTGATGGAGAAACTATTTC
ACAGTATGCCATGTTGATATGGCAACTTCATCGGGATAAAGATAAAGCCTCAACCTACTT
TAAGAGGGCAGTTCAAGCTTCTCCAGAAGACGGGTAATATTGAATTGAAGCCCCTCATTT
TTTTATTCGCAACATTTAGAATTAAAAGTAATAGCGGTAACTTAATAACCTAAGCACATT
TCCTACTTCGTCAGTTACTAAGACGGTTTAACAGATTTATGTGATGTGTAAAGGAAATCT
GCTACTATTTGATAGCATTGAAAAGGTTAATGAGAAAAGATACAAATATAAGGTTGTTGG
TAACTTGGTATTATGCGAATGTATTGGTGGGAAAATATTAAAATTTTTGGTGATCTTTGG
TATGATGTCAAATCATTTGTGCGTTGCGTTTAAATTAGAAATTGTGTGGTTGCTACTTGC
ACATCTAGTTCATTGTTCTCATTGTTTGGGACTCTGAGTTACTAGCTTGCTTTTTTGCTT
TTCAGCGACGTGCTTGCTGCATATGCTAGATTTCTCTGGCAAACGGAGGAAGATGAAGAC
GGAGAAGAAGATGAAACATTAGGTGATCACAACGGTGCACCACCTTTGCAAGGAGTCATG
GCTGCAAATGCCTAAATCCTGATGTCAAATGAATTCACAATCCAGCTTCCAATTCTTAAT
TTAATTTTAGTTTCTCAAGCTTTTCGCGTTATCTAAAGACTTGGAGCTTTCTCTTGTTGT
GGAGGATCAAGCATTGTGGGAAATTTTTTAAATGGTAAATGTTGTTTAGTGAGCAATAAA
ATGTGAACACTAATGTTAAATTGACCTTGTACAATGTTCTTTATGGGAATAATATGAAGA
AGTTGATTAAAAATTTAAATGGAGACTTCACATTGT
