Microarray Probes on PGSC0003DMT400003894
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_5357_PI426222305 |
JHI_St_60k_v1 |
GTCTCTTGCCAATGAAAATAGTATTGTATATCATAAGCATCCGAGTATTGTAGGACATGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400003894
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400003894 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G35690.1 |
+3 |
2e-42 |
150 |
105/295 (36%) |
Arabidopsis protein of unknown function (DUF241) | chr4:16921886-16922740 FORWARD LENGTH=284 |
Transcript Sequence (1006 bp)
>PGSC0003DMT400003894 1006 pgsc_dm_v3.4
GAAGTTTTGGTATAAAATAAGATGAGTTTTGAAGGTCTTTCTTCATCCCCAAAGAAAAAC
AGAGGAAAAAGATGTCAACTTTTTCATCAAAATCCAATAAAAGATCCATCAGTTTGCCAA
GCAGATCACATCCAGCTACACAGAATATTGAAGAGGAGATCAACAAGCTCAAAACTTGGG
AATTCTCGGCTTCACCAACTGCAGAAGCTGTTTACAGTGGTCTAATTGGTTTGGGGGAGG
TGCATAAGTGCATGGTTGATCTTTTAAACTTGCCCCTCACACTTCAATCCCTTTCTCAGT
GCCAAAACAAGAAATGGGTCGATGAAATCTTGGATAAATCTGTGAGATTTCTTGATATAT
GTAGCACAACAAGGGAGATCGTATCGCAATTTAAGGAAAATGTTAAAGATGTTCAGTCTT
CACTCAGGAGGAGAAAAGAAGATTTGAGCATCAACAACTACACCACATTCAGGAAGAAGA
TGAAGAAAGAAGCCAAAAGTTTGATTACAGCTTTGAAAAGAATGGATCATGAGGAAGTAG
TTGATGTAATGGAAGTTGATGATCAACTTGTCTCAGCTGTTATCAGAGTCCTAAGAGAAG
TTGCAACAATGGGAATTTTAGTTTACCAAATGTTGTTGAATTATTTGTCAGCCTCAAATT
CTAAGCCAATTAGCAAATGGTCTTTGGTTTCAAGATTAGTCAACAAGGGTGTAGATCAAG
GCAATACTGTAAATGAAATAGAAAGTGTTGATGCTGCATTAAGCAGTCTTTCCAAGTGTG
GTCCTAATGAAATGGAAAAGATCCAATTTGTGCAGAGCAAATTAGAAAGAGTGGAAGCTC
ATTTTGAATGCATTGAGAAGGGTCTTGACAACATCTTTAGATGTTTGATCAGATCAAGAA
GCACACTATTAAATGTTGTCTCTTGCCAATGAAAATAGTATTGTATATCATAAGCATCCG
AGTATTGTAGGACATGTTTATGAAAACCTTGTAAAGGAATTTTTTT
