Microarray Probes on PGSC0003DMT400003477
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_1383_PI426222305 |
JHI_St_60k_v1 |
TGGTGAAACTACTGAGTTTCTTAAACTTGGTCCAAGTTTCATGAAAAACCAAAGAGCCAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400003477
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400003477 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) |
Solyc02g089160.2 |
+1 |
0.0 |
905 |
439/453 (97%) |
genomic_reference:SL2.50ch02 gene_region:45622003-45624825 transcript_region:SL2.50ch02:45622003..45624825+ go_terms:GO:0004497 functional_description:Cytochrome P450 |
| TAIR PP10 |
AT5G38970.1 |
+1 |
0.0 |
660 |
312/448 (70%) |
brassinosteroid-6-oxidase 1 | chr5:15594935-15597774 REVERSE LENGTH=465 |
Transcript Sequence (1680 bp)
>PGSC0003DMT400003477 1680 pgsc_dm_v3.4
CACGCTTGGCTAACTATTATGACTTAAAGTTCTCTCTTGTGAAGTATAGTAAAAGTAAGG
AAGTCCATACCATTTAGACTACTCTCTGTGAGGTGGTTGGTAACTTCTTTTGAATTTTGA
GCTGCATCAATGGCCTTCTTCTTTGTTTTCCTTTCTTCCTTTTTTGGCCTATGCATCTTT
TGTACTGCTTTATTAAGATGGAATCAAGTCAAGTATAACAACAAAAACTTGCCCCCTGGT
ACTATGGGTTGGCCACTTTTTGGTGAAACTACTGAGTTTCTTAAACTTGGTCCAAGTTTC
ATGAAAAACCAAAGAGCCAGATATGGGAGTTTTTTCAAATCACACATACTTGGTTGTCCA
ACAATTGTTTCAATGGATCCAGAACTGAATAGATATATACTTGTGAATGAGGCAAAAGGA
CTGGTCCCAGGATACCCACAGTCTATGCTAGATATTTTAGGTAAATGTAATATTGCAGCT
GTCAATGGTTCAGCTCACAAGTACATGAGGGGTGCATTGTTATCTCTAATTAGCCCTACA
ATGATCAGAGACCAACTTTTGCCCAAAATTGATGAGTTTATGAGATCCCACTTGAACAAC
TGGGATAATAAAGTTGTTGACATTCAAGAAAAAACCAATAAGATGGCATTTCTATCATCG
TTGAAGCAAATTGCTGGGATTGAATCTACCTCTTTAGCTCAAGAATTCATGCCTGAATTC
TTCAATCTAGTACTAGGAACTCTTTCACTACCAATCAATCTTCCCAACACCAACTATCAT
CGCGGATTTCAGGCAAGGAAAATTATTGTGAACTTATTAAGAACACTAATTGAAGAGAGA
AGAGCTTCGAAGCAAATTCAACACGATATGCTTGGTTATCTGATGAATGAAGAAGCAAGT
CGATTCAAATTAACAGATGATGAGATGATTGATTTGATTATAACTATTTTGTACTCTGGC
TATGAAACTGTTTCCACTACTTCTATGATGGCTGTTAAATATCTTCATGATCATCCAAAA
GTTCTTGAAGAACTCAGAAAAGAACACATGGCTATTAGAGAAAAGAAAAAACCTGAGGAT
CCTATCGATTACAACGATTACAAGGCAATGCGGTTCACACGAGCTGTGATTTTAGAGACC
TCCAGGCTAGCAACAATAGTAAATGGGGTTTTGAGAAAAACAACTCAAGATATGGAAATA
AATGGGTATATCATTCCTAAAGGATGGAGAATATACGTATATACGAGGGAGTTGAATTAC
GATCCAAGACTTTATCCTGATCCATATACATTCAATCCATGGAGATGGATGGATAAGAGC
CTGGAACACCAAAACTCATTTTTGGTATTTGGAGGTGGTACTAGACAATGTCCTGGAAAG
GAACTTGGTGTAGCAGAAATTTCTACATTTCTTCATTACTTCGTAACAAAATACAGATGG
GAAGAAGTAGGAGGAGATAAACTGATGAAGTTTCCAAGAGTTGAAGCACCAAATGGTCTA
CGGATTAGAGTTTCAACTCACTAACTATCAATTCATGAATGTACAGAGCAAAAAAAATGG
AGAGATTTGTAGGATGCAAAGCTAAGAGTAACATGGGATGTACAACTTAATTATTATTCC
CGCTAACATAATCACGAATTAAACACAATTTTTTCTCAGAGTTTATCAATCTTATACGGT
