Microarray Probes on PGSC0003DMT400003465
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_1316_PI426222305 |
JHI_St_60k_v1 |
CCCTATTTCATAACCCCATTGTTTGACGACGTCAACTCTTTTATGGAATGTCTTATAAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400003465
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400003465 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) |
Solyc02g089090.2 |
+2 |
1e-93 |
298 |
156/246 (63%) |
genomic_reference:SL2.50ch02 gene_region:45568082-45571263 transcript_region:SL2.50ch02:45568082..45571263+ go_terms:GO:0004672 functional_description:Pto-like, Serine/threonine kinase protein, resistance protein |
| TAIR PP10 |
AT3G51550.1 |
+2 |
9e-72 |
239 |
132/246 (54%) |
Malectin/receptor-like protein kinase family protein | chr3:19117877-19120564 REVERSE LENGTH=895 |
Transcript Sequence (884 bp)
>PGSC0003DMT400003465 884 pgsc_dm_v3.4
ATTTTGCTGTATAGGTACCAAACATATGATCATTCATCGAGATGTCAAGTCAACTAACAT
CCTATTGGACGATAAATGGGTCGCCAAGGTGTCCGATTTTGGATTGTCCAAAGTAGGTTC
AGTAGGTGGGACAGATATTACCCATGTTAGCACTGCAGTGAAAGGAAGTTTTGGGTATGT
AGATCCTGAATACTACAAGCGCCAACGATTGACAGTAAAATCAGATGTTTATTCTTTTGG
GGTGGTTCTATTTGAAGTGTTATGCGCTAGACCGGCAATAAATCCAAACTTGCCAAGTGG
GCAAGTGAATTTGGCTGAGTGGGCTAGTAGGAGTTGTAAAAAGAGAGAACTTGAAGAAAT
TATTGATCCTAACTTGAAAGGACAAATAGCCCCAGAATGCTTAAGCAAGTTTGCAGAATT
GGCATATCATTGTTTGAGAAAAGAAGGGGTTCAAAGGCCATCAATGGGTGATGTTGTAAA
AACTTTAGAATCTGCATTACAGGTTCAAGAGGGTGAAGATCATGAGGTGGAAGGATCCTC
TTTTCCGTTGATTATTAATGGTGATGCTATGAATGAAGATGAGATATTCTCAGATTTAAG
TGAAGTTGAAAGAAAATTGACAAGCAATGGTATATCCATGTCGGTCAGTAGGAGTGCCAA
AGTGAACAATGTTGCCCTTTTCTCTGAGATTATCACTCCATTGGGTCGATGAAATTGTTA
TGATCATAGTTCGATACACTGAAATTACATGTATTTTAATTTGTTTTTCAGCTTCTTTTT
GCAATTTAATGGGTACATACATGGCCCCTATTTCATAACCCCATTGTTTGACGACGTCAA
CTCTTTTATGGAATGTCTTATAAAAAATATTTCTTAAATCACTT
