Microarray Probes on PGSC0003DMT400003003
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_12474_PI426222305 |
JHI_St_60k_v1 |
AAAGTTGGTTTTTCCATTCCATGTTGGCTGAGAAAATGAGTTAAAATGGTGATTAGCGTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400003003
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400003003 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G19310.1 |
+3 |
7e-68 |
218 |
105/193 (54%) |
RING/U-box superfamily protein | chr1:6676424-6677104 REVERSE LENGTH=226 |
Transcript Sequence (1287 bp)
>PGSC0003DMT400003003 1287 pgsc_dm_v3.4
AAGCGATATATAGCTAGTTTTGGTATGATGGGGGTGTCATCGCAACTCAATCACATATGA
TGGAATCATCAAAGATGTGACATTTTCGAAATATGTTTATAACTCACTAGAGGCCTGGGT
CGGTCCAACAGATTTCTTGAGTGACCGGGTTTGTTTATGGAATGGAAACAATGTAGGGGT
CTAGCTTACTGAAAAACCTGTGCTTGCAAAGTTGAATATTTTGAGCAAATGACTTTGGTT
CAGTTTTTGTAATGCTCATGTGCCATTCATTCTGTTTATCTGGATCTTGCTATCGCATTC
GTAGTGCCTTTGGACTAAAGTTTGTTTTTAATATGTTTGCAATTGACAGGTGAAGTGCAT
TTTTGTGTGCAAATTGTGACATTGAGTGAAATATGCAGAACTCAACTGCCACAACATTTG
AGAGTTCTTCGTCCTCAGGGAATGGCAGTAATGATGCTGGTGATTTTGAATGCAACATCT
GCTTTGAATTGGCACAAGATCCTATTGTGACCCTCTGTGGTCACCTCTACTGTTGGCCAT
GTCTGTATAGATGGCTAAGGCTTCATTCACAATCCCATGAGTGCCCTGTTTGTAAGGCTC
TAATACAAGAGGAAAAGCTTGTTCCTCTTTATGGAAGAGGGAGGACTTCAACTGATCCCA
GATCAAAACCAGTACCTGGAGTTGAAATTCCTAGAAGGCCAGCAGGGCAAAGACCTGAAA
CGGCGCCTCCACCAGAATCGCATACTTTTCCTAATCCCGGGTTTGGTCTTATGGGAGGAT
TGTTTCCAGGAGCAACTGCAAGTTTTGGTAACTTCACAATGTCTGCTGGTTTTGGTGGAT
TATTCCCATCATTGCTCAGTTTTCAGTTTAATGGATTCCAAGGTCCAGCTGCATTTGGTA
CAGCACCAAATTACCCATTTGGGTATCCTCCTGCATATCATGGCGCGAATGTTCACAATG
CTGCTGCACAATCATCCCAAGGACAGGCAGATAATAATCTGAAGTTTATGTTCTTGCTTG
TTGGATTTCTTGTATTCCTATATTTGTTTGGTTATTGAATGAACTTTCTCCTTTAGCTGT
TGCCCGAATACTGACTTGTAGTAATCATTCTTAATGGTTGTAAATATGTTGAATTTTTGC
ACTCTGAAGTTGCAACACAAAGATGAACTGATGTGATTAGTGGAATCTGCGTTGCAACAC
GAGAATTGTGGTTCTTGATTGTTCATTAAAGTTGGTTTTTCCATTCCATGTTGGCTGAGA
AAATGAGTTAAAATGGTGATTAGCGTG
