Microarray Probes on PGSC0003DMT400002985
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_16918_PI426222305 |
JHI_St_60k_v1 |
GTTGTACTACCTCCATCCACTTTTAATTGTCATATTGCGCTTTTCGAAAGTCTTGACTAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400002985
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400002985 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G30135.1 |
+1 |
2e-19 |
83 |
53/131 (40%) |
jasmonate-zim-domain protein 8 | chr1:10596516-10597095 FORWARD LENGTH=131 |
Transcript Sequence (752 bp)
>PGSC0003DMT400002985 752 pgsc_dm_v3.4
CTAAAGTCCATTTTCTTCTTAATCCAAAGTTCAGTACAGATTAATTCTTAGCTTAATTTA
CTTTGTACATTAGTTTGAAGAATTATTAAGATGAGAAGAAAGTGTAATTTGGAGCTCAGA
CTTGTTCCTCCTGCCCCATACTTCGACTCCATGGGAAATAAAGAAAGCATAGATGAAGAG
AAGGAACAACAGCAGCTAACAATATTCTATGATGGAAAAGTTGTGGTTTCTGATGCTACT
GAGGTTCAGGCTAAAGCTATAATACATCTTGCAAGTAGGGAAATGAAGGAGAACACAAAA
ACACTATCGTCACTTTCAGAGCCACCATCACCATTATTACAATCTCAAACTGAGGTTTCT
ATGAAAAAATCTCTACAAAGATTTTTGCAGAAGAGAAAAAGTAGAACTCAAGCAATTTCT
CCATATCATCAACAACAATAACAATAATAATATATCCAGTGAAATCTCACATGTAGGGTT
TGAGGAGAATACAATGTAGGTAAACTTTATCACTACTTCATGGAAATAGAGAAGCTATTT
TCAGGATACTTATCCATATCATCACTAGCTACTAAATAGACTATTTTGGTTATCCTTTAT
TTATTTATTTTAACTTTTCTCCCCGGCCTTCTTCAAGTTTGTGTTGTACTACCTCCATCC
ACTTTTAATTGTCATATTGCGCTTTTCGAAAGTCTTGACTAATTTTTAAAGTTAAATTAA
ATTACATTAATTCGATATTTTAAACAAAAAAA
