Microarray Probes on PGSC0003DMT400002568
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_23289_PI426222305 |
JHI_St_60k_v1 |
GGTCCCAAAGCGGATACTAGATATATATACTGGATGGGAAACATTAAAAAATGTGTCATT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400002568
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400002568 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G16010.1 |
+2 |
4e-64 |
208 |
97/157 (62%) |
3-oxo-5-alpha-steroid 4-dehydrogenase family protein | chr5:5227982-5229012 FORWARD LENGTH=268 |
Transcript Sequence (1086 bp)
>PGSC0003DMT400002568 1086 pgsc_dm_v3.4
CAATTGTAGTGTATTTATAGCCTTATGCCCTTTAGAACATGAGAACAACAAGGTCCACCA
CAATTTAGTTTTTGGTACTTGTGAATGGTATGTTCTTTTAATAGCACGAAAAATTGCAAT
GGAGTGGTAAGTATCCTTCTTTCTTTAATCAGAAATTTTGGTTTATATCACTTGAACTCT
TTAGAAATGTCTTTGTCGGGTGTATGCTGATTGGATCTTCCAAAATTAATCCATTTTTAG
AGGATTTGACACATAAGGGTAACATAATTTTAGATAATTCGCTCAAGTCTTGAGAATGAA
GTCGCCTTTGATAGCTTAAAAGTGGGACTTCTAGGTGTGAATTAACCCTGATTAGTTTGG
TCCCAAAGCGGATACTAGATATATATACTGGATGGGAAACATTAAAAAATGTGTCATTTA
AACTAGTCTCTTTTAGTGAAGTTAGCTACAAACTTATCTTGAACAAATCCTAATTCCTTT
GCTTTGTTGATACTAGGTCCTATTTGTTCACAAATACAGTGGTTCAATGGATGTTGAAGA
TGCAATTGCAATATCATTAAGTTATTTCCTCTCCACAATTACCATGATTTATTGTCAACA
CCTTTCTCAAGATTTGCCAGAGCCATCCATTGATCTCAAGTATAGTGGATACATAATATT
TTTGGTTGGTATAATTGGCAACTTTTACCATCATATTTTGCTCTCTAAATTGAGAACAAA
AGGTGAAAAAGAGTACAAAATTCCTCAAGGTGGCCTATTTGATTTTGCAACATGCCCACA
TTATCTCTTTGAGATTCTTATATTTGTAGGAGTTTCATGCACTTCTCAAACATCATATGC
AATTTCATTCACTTTGGGAACTATCTTTTACTTGATGGGAAGGAGCATTGCTACAAGAAG
ATGGTACAAGTCAAAGTTTGATGATTTTCCAAAGGATATTAAGGCACTTATTCCTTACAT
ATTTTAGGTTATAACTTGCAATAGGACCTTCAATTTTTGTTTGTGTGGTTATGTTGAACA
AGTATTTTAAGTTATGAGTTATTTATGTAGATCCTTTAAATTATGTTTAATCTTAATAAA
AAAAAT
