Microarray Probes on PGSC0003DMT400002557
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_23360_PI426222305 |
JHI_St_60k_v1 |
AAACACTAGAAGATACAATTAGAACTGTTGAAGATGGTCCGGGACAACACCCGACTCAGG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400002557
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400002557 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G20330.1 |
+1 |
6e-157 |
449 |
241/333 (72%) |
PYRIMIDINE B | chr3:7090354-7091904 REVERSE LENGTH=390 |
Transcript Sequence (1041 bp)
>PGSC0003DMT400002557 1041 pgsc_dm_v3.4
ATGACTATTTCCGCAACATTTTCTTCCCATGGAAAAATACTCATGTCACCTCTTAGAAAG
AGTGAATGGGCAAATCAACCTGTGCTCTGTAAATCTGTTGAATTGTTTAAAAATGGACGA
AATCAATATCGTATGTCAACAAATAGCAACAAATTCCAATGCCGAGCATTGGAGATCGAA
AATAAATCTTCAACTAAGTTTCACCTTGATGATGTAATTGAATCTCAACAATTTGATAGA
GAAACTCTTAGTGCGATATTTGAAGTAGCACGGGAGATGGAGAAAATCGAGAAGAATTCG
ATTGGAGGAAGAAGCGAGATTCTTAAGGGTTATCTCATGGCTACTCTGTTTTATGAACCT
TCAACTAGAACTAGACTTTCATTTGAATCTGCTATGAAGCGTTTAGGAGGAGAAGTATTA
ACAACCGAAAATGCTCGTGAATTTTCATCTGCAGCAAAGGGGGAAACACTAGAAGATACA
ATTAGAACTGTTGAAGATGGTCCGGGACAACACCCGACTCAGGCACTTCTAGATGTGTAT
ACAATTGAACGAGAAATAGGGAAACTCGATGGTATAAACGTTGCTCTTGTTGGTGATCTA
GCATACGGGAGGACAGTTCGTTCACTTGCTCATTTGCTTGCAATGTATGAAGATGTGAAA
ATTTACTTTGTATCCCCTGATGTTGTTAAAATGAAGGATGACATAAAGGATTACTTGACA
TCAATGGGGGTTCAATGGGAAGAAAATGCTGATTTGATCGAGGTGGCTTCTAAATGTGAC
GTGGTGTATCAAACTCGTATTCAAAGAGAGAGATTTGGAGAGAGGGTTGATTTGTATGAA
GAAGCTCGAGGGAAGTATATCGTTGATATGAGTGTCGTAAATGCTATGCAGAAACATGCT
GTAGTGATGCATCCTTTGCCAAGACTTGATGAGATTACTGTTGATGTTGATGGTGATTCG
AGGGCTGCTTATTTCAGACAAGCTAAGAATGGTCTTTACATTCGGATGGCGCTTTTGAAG
CTTCTACTCCTTGGTTGGTGA
