Microarray Probes on PGSC0003DMT400002375
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_23709_PI426222305 |
JHI_St_60k_v1 |
AGAGAGAAGTCATATTTTCTGGACTCTCCCATGTGAGTTCCTAGAAAATTCTTGTTAAAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400002375
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400002375 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G44830.1 |
+2 |
4e-31 |
119 |
100/197 (51%) |
Integrase-type DNA-binding superfamily protein | chr1:16933792-16934427 FORWARD LENGTH=211 |
Transcript Sequence (1094 bp)
>PGSC0003DMT400002375 1094 pgsc_dm_v3.4
CTTCATCAATATCCACCTCAAAAACACACACAAAAACAAGAAAAAGAAGCAAACAAAACA
ACACTATTCTTTCAAGATTCAAGCAATGGTGAAGACAGAGCAAAAAAGTTTAGTAGAGCC
AAACAAGAAATCAATGTCAATATCATCATCATCTTCTTCAACATCAAGCAATATCAATAA
CATGAAGATGAAGAAGAATAAGTACAAAGGAGTTAGAATGAGAAGCTGGGGATCATGGGT
ATCAGAAATAAGAGCACCAAATCAAAAAACAAGAATCTGGTTAGGTTCCTATTCTACCCC
TGAAGCTGCTGCTAGAGCTTATGATGCTGCACTTTTATGCCTAAAAGGCCCTTCTGCTTC
TTCAAATCTCAACTTTCCTTTTGACTCTTCTTTCTATCACCACATTGATCATCACACTTC
TACAACACTCTCTCCTAAAGCCATTCAGAGAGTGGCCGCGGCAGCCGCGGCCACTCCTGA
ACAAAATGTAGGGTTAGTACTGTCAGATGACAGTACTAACCCTACTATTTTATCATCTCC
ATCTCCACCGCCTTCTTCTTCTACTACTACTACTTCTTCTGAGGATATAAATGATGTTTG
TTTATTACCAAATTATACTTTTGATCAAGAGATGTCAATGATTGAGCAATGGTACAATTT
TGATTCACCAAAGTATAATGACATGTTACATGGTACAGTTTTCTTTGATCCACCTTCAAT
GGAGGATGTTTATTATGAAGAATCATCAGCAGATATCCCTTTATGGAGTTTTTGCTAATC
ATCAAGATCTCACTTCAATTATTTAATTATTCTTTGAAAGAAAAAACAAAAAAAAAAGTT
TTTTCTTTTTTTTACATGTGATGTCAAGTTAATTTTTTCTTGAACAACATCACTTACATA
GACTAATTTTATTTATATTTATTACTATTAGGGGAAAAAAATTTAGGGACAATACAGAGA
GAGAAGTCATATTTTCTGGACTCTCCCATGTGAGTTCCTAGAAAATTCTTGTTAAAGATA
TATTCTTTAATAGAAGTGTGTCATATGCTGTATCATTTATTGTGTACTCAAAGTGCAATA
AAAAAATGGTGGGA
