Microarray Probes on PGSC0003DMT400001535
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_17569_PI426222305 |
JHI_St_60k_v1 |
TGTTTTCCTCTGAATCTCTGGTGGCAAACAATGACAATAAATTTCAACTTAGTAGTGAAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400001535
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400001535 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G27870.1 |
+1 |
5e-50 |
182 |
99/199 (50%) |
Vacuolar iron transporter (VIT) family protein | chr4:13878983-13882679 FORWARD LENGTH=761 |
Transcript Sequence (1398 bp)
>PGSC0003DMT400001535 1398 pgsc_dm_v3.4
GAATAAACAAATAATGAGTCCTTTCTGTCTTCAGCAACCACAGCTTTTGCACTCAACGGC
TTAGATGGAAATGGGAAACCCAATTTTTTGACAGAAATCCCTCAAGAACATGTGCAACAT
ATCGAAGCCATGTTTTCCTCTGAATCTCTGGTGGCAAACAATGACAATAAATTTCAACTT
AGTAGTGAAGACGGCGCCCATCACTATGAAGTTTCTCAGCATACCATCACAAAGACCAAT
ATAGAGATCCACTCAAAGCAGCCTTTAAACGTTGATGAGCATGACTTGATTTCATCGGTG
AAGGATGCTTTATCAATTCAAGATAAGCTGGATAACATCCCCAACATTACTGTGGAAGCA
GCTGCAAATAACATTGCAGGCAACGATACTATTATAACTGTGGAAGCTGGGCATGAAACT
AGAGAAACAGCTTCAGCAAATCTAGATACTCAAATCCAATCTGTTGAAGGACAGGCAACT
GATGGTGCAGATGGTTACAAAATTGAGATCATTAAAAGCATTATATTTGGGGGTTTAGCT
GAATCAATTACAAGCTTAAGCGTTGTAGCGTCTGCTACTGGTGGTGACACAACTACATTG
AACATTTTAGTTCTAGCAATGGCTAATCTGATTGGTGGACTTTTCATCATTTTCCACAAT
CTTTGGGAGTTGAAAAGAGATCGTTTCGAGCAAGCCAGCAATCAGATAATGGAAAAACAT
GTAGATAGGTATCGAGAACAACTTGGCCGGAGAGAAAACTTCACACTGCATGCTGTACTT
GTTATATTATCATATATTATATTTGGACTATTGCCTCCCGTAACCTATGGCTTCTCGTTC
CGCAAAAGTGATGACAAGGACCTCAAGATTGTGGCAGTTGCTGCAGCTTCACTTGTATGC
ATCTTAATGCTGGCTACTGGAAAGGCCTATGTTCAGAGAGCACCCAAACCTTACTTCAAA
ACTATATCAACTTACATTATTTTAGGCTTCACGGTTTCTGGTGTATCTTATGCAGCAGGC
ATACTATTCAATAGACTGCTGGAAAAGTTTGGGTTTTTCCAGCCTAGTTCAACACTGAAC
CTGTTCCTTCCGGAGATGCCGGAGACTGGAGCAGCATGGGCATCCTTTTGAAGAGCAGAG
AATGATGAACCACAAACATGTAACCTCCAGGAATATCCTCTAGTTCTTTATGGTTTGCTT
TTTTTGGCTTTTTTATTTTAGATTTAGCCTCTCCCCTTGTTATTTTAAGTTACTTAGTTT
AAACACTCGATAAGAATAAATATCTGCATTACAATACTTGCGTTAGTAATCTATGCACAA
CTTGCTTCCAAACCAAACGACCCTGAATGAAAAGAATAGAAACTCTGCTGAGTTTCTGAA
AGAAAATTGAAATGAAAG
