Microarray Probes on PGSC0003DMT400001025
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_26531_PI426222305 |
JHI_St_60k_v1 |
TGGGGAACAGCCAATAACAGTTTCATCGTTGTTGAACCTTTGGATTTCTCTCAACGAATT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400001025
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400001025 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G24520.1 |
+2 |
7e-86 |
271 |
133/203 (66%) |
heat shock transcription factor C1 | chr3:8941455-8942531 FORWARD LENGTH=330 |
Transcript Sequence (1556 bp)
>PGSC0003DMT400001025 1556 pgsc_dm_v3.4
GCCCAACCCAAAAAAAAAAATCTCTATAAAACCATATCCCTTACATTTACATATTCTTCT
ACAACCACTACGGCTGCCATTGCCATAACCTTCCACAACCGTGAAGCTCCGCCCAACTCC
GTCAATCTCCGACTCGCAAAAACACCGGAACGAGCTATATATATATGGGATGGAGGCTAA
CAATATTATTGCTCCGTTCGTGATGAAAACTTATCAAATGGTGAATGATCCAAAGATTGA
TGGACTTATAGCTTGGGGAACAGCCAATAACAGTTTCATCGTTGTTGAACCTTTGGATTT
CTCTCAACGAATTTTGCCTGTTTACTTCAAGCACAACAATTTCTCCAGCTTTGTTCGTCA
GCTCAACACCTATGGATTCAGAAAAGTGGATCCAGATAAGTGGGAATTTGCAAATGAATG
GTTTCTGAGAGGACAAACGCATTTGTTGAAGAACATAGTGAGGAAAAAGCACAGTAGAAA
TTCATGTTCTCAGAAGCAGGATGAGAGTGAAGACGAAGAAATTTTTACAGAGATTTCCAG
ATTAAAGCAGGAACAAAAAGTTTTAGATCATGAAGTTGAGAATATGACTAGAAGATTAGA
AGCTACAGAGAAGAGGCCACAGCAAATGATGGCTTTTTTGTGTAAAGTTGTTGATGATCC
TGAGATTTTGCCCAGAATTTTAATGGAGAAAGAGAAATCCAAACGGCTAAGTTTAACAAA
TCGTGAGAAAAAAAGGAGACTTATGATTTCGAATTCAACGAGTTGTTCTTCAGTGAAGAG
TGAAGATGCAGTAGGGGCAACATCGTCATTTCACTCACCCGACGCGAATTTCGATAAGGA
TGCGATCTGTCAGTCCTCTCCGTCATCGGGAACTCCGCCGCCGCCGGCGTGGCTAGGTTG
TCGGCCAATGATAACTTATGAGCCAGGTACGATACAGTCGATTCGATCTCCTGACGCGAA
TTTCGATAAGGATACGTTCTATCAATCCTCGCCTTCGTCGGAAACGCCGTCCACGGCGTG
GATGAGTCAGCAAAAAGTCGTCATCGGTGGCCGGCCGATGATGATGACTAATGAAGCTTA
CGGAAGTTGTCCTACTATGTCTAGTACATTGTCAACTGGCTCGTCGGAGAGCGGCGGTTT
CACGGCTCCACCAATGGATAACTTTTACGGTTACGACTATGGCGGCGGTGGAGGTGGTGG
AGGAGGAGGAACTACGGCGACGGAGGAAGCTAGTCCACCGCCTTATCCATTTTCATTATT
CGGTGGTGGATTTTAGTTTAGTTAAAATAAAATGATTTATAATTATGTGAGCTATATTCT
ATAATAGCTTTTGTAATTATTTTAATTCATTTTTGATAATTTTCCTTTTAATTATGCAAA
TATTCTACAAAATATGTAATCTGAAAAAGTGAGACCTCCCCAAGTTAACATTAATTATAG
GACTAATAAAAATTAGCTAGGGAATACAGGTTCATTTTTTGTATCTTTGCTTGATAATTT
TGCTAATTTAGCATAATTATGTGTGAAGTTTTTCTTTTTATTATTATCGTTGTTGC
