Microarray Probes on PGSC0003DMT400000898
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_26564_PI426222305 |
JHI_St_60k_v1 |
GATGTTATTGAAACTTATGTTTTCTGGAATGCACATGAGCCTTCTCCTGGAAAAAAGAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400000898
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400000898 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G13750.1 |
+2 |
0.0 |
897 |
428/600 (71%) |
beta galactosidase 1 | chr3:4511192-4515756 FORWARD LENGTH=847 |
Transcript Sequence (2679 bp)
>PGSC0003DMT400000898 2679 pgsc_dm_v3.4
AAGAAAAAAAGTTTCATTTTTTTTCTATAAAAGAAAAAAAAATTTAATGTGGAAAAAATG
CTAAGGACTAATGTGTTGTTGGTGTTATTATTAGTTATTTGTTCATTGGATTTTTTTTCT
TCAGTGAAAGCTAGTGTTTCTTATGATGACAGAGCTATAATCATAAATGGGAAAAGAAAA
ATTCTTATTTCTGGTTCAATTCATTATCCAAGAAGTACTCCACAGATGTGGCCTGATCTT
ATACAAAAGGCTAAAGATGGAGGCTTAGATGTTATTGAAACTTATGTTTTCTGGAATGCA
CATGAGCCTTCTCCTGGAAAAGGGATTCCCTGTTTGGCTAAAATATGTGCCTGGTATGGA
ATTTAGAACAGACAATCAGCCTTTTAAGGTGGCTATGCAAGGATTTGTTCAGAAAATAGT
CAACATGATGAAGTCAGAAAATTTGTTTGAACCTCAAGGAGGACCAATAATAATGGCCCA
GATAGAAAATGAGTATGGACCAGTAGAATGGGAAATTGGTGCTCCTGGTAAAGCTTTTAC
AAAATGGGCAGCTCAAATGGCTGTGGGTTTGAAAACTGGTGTCCCATGGATCATGTGTAA
ACAAGAGGATGCTCCTGATCCTGTGATTGATACTTGCAATGGCTTCTACTGCGAAGGGTT
CCGTCCTAATAAGCCTTACAAACCGAAAATGTGGACAGAAGTATGGACTGGCTGGTATAC
AAAATTTGGTGGTCCAATTCCTCAAAGACCAGCTGAAGACATTGCATTTTCAGTTGCAAG
GTTTGTTCAGAACAATGGTTCATTCTTCAATTACTACATGTATCATGGAGGAACAAATTT
TGGCCGGACATCATCAGGGCTTTTCATTGCAACTAGCTACGATTATGATGCTCCTCTCGA
TGAGTATGGGTTGCTGAATGAACCAAAATACGGGCACTTGAGAGACTTACATAAAGCTAT
CAAGCTATCTGAACCGGCTTTAGTTTCATCATATGCCACGGTGACTAGTCTTGGAAGTAA
TCAAGAGGCTCATGTCTATAGATCAAAATCTGGAGCTTGTGCTGCTTTTTTATCCAACTA
TGACTCTAGATATTCAGTTAAAGTCACCTTTCAGAATAGGCCATACGATTTGCCTCCATG
GTCCATCAGCATTCTTCCCGACTGCAAAACTGCTGTTTACAACACTGCACGGGTTAACTC
CCGAAGCTCGAGCATAAAGATGACGCCTGCAGGTGGTGGATTGTCTTGGCAGTCATACAA
TGAAGAAACACCGACTGCTGATGACAGTGATACACTTTCAGCTAACGGACTATGGGAACA
GAAAAACGTCACAAGAGATTCATCAGACTATCTGTGGTACATGACAGATGTAAATATAGC
ATCTAATGAAGGATTTCTAAAGAACGGAAAGGATCCTTATTTCACTGTTATGTCCGCTGG
TCATGTCTTGCATGTTTTCGTCAATGGCAAACTATCAGGAACTGTTTATGGGACATTGGA
TAATCCAAAACTTACATACAGTGGCAATGTGAAGTTAAGAGCTGGTATTAACAAGATTTC
TCTGCTCAGTGTTTCCGTTGGTCTCCCGAACGTTGGCGTGCATTATGATACGTGGAATGC
AGGAGTTCTAGGTCCAGTTACGTTGAGCGGTCTCAATGAAGGGTCAAGAAACTTGGCGAA
ACAGAGATGGTCTTACAAGGTTGGTCTAAAAGGCGAATCGTTAAGTCTTCACTCCTTAAG
TGGGAGTTCTTCTGTTGAATGGATTCGAGGTTCACTAGTGGCTCAAAAGCAGCCTCTGAC
TTGGTACAAGGCTACATTTAACGCGCCTGGAGGAAATGAACCACTAGCTTTAGACATGGC
AAGTATGGGAAAAGGTCAGATATGGATAAATGGTGAAGGCGTAGGTCGCCATTGGCCTGG
ATACATAGCACAAGGAGACTGTAGCAAATGCAGTTATGCTGGAACGTTCAACGAGAAGAA
ATGTCAGACTAACTGCGGACAACCTTCTCAGAGATGGTACCACGTTCCACGATCATGGCT
GAAACCAAGTGGAAACTTGTTGGTAGTATTTGAAGAATGGGGCGGTAATCCAACAGGAAT
TTCTCTAGTCAGGAGATCAAGATAAAGAACTCGAAAAGTAAACTTGTTCAGTAAATATGG
TGCTTGAATTCGCGCCGAAAAATACATACAGGAAGCTAACAATGAAGGCTATAGTTTGCA
AATTGCAGCTGAATAAAGCATTTGAAGAAAAAGAAATATTTGATTAAAAGGTATATAAAT
TTACAGAGAGTTTTCTTGATTCTCTGTAAAACTTTGGTTTATAAAGTTTATACAGAATTC
TGTTATTTGGATTATGAGATTGAAGAAAATTGTACAGCTTCCAAATACTATTAGAATACA
AATAAGTTTCATGTAACTATATACAATTACTACAATTTGTGTATGTGAAATATCAATACA
AGTTATATCAAGGAAGTCAATTTTTCAGTAACCAGATGTTTCAGGTTGGAGTTCTGAGGT
TTGAGTCGCTTTTAGTTTAAGTGTTTTAACCCTCAAAGTGAGATTTTCCAGTGCGGATCC
AATTATACTAGTTGGGCTCCAAAGCATGTACCAAACACAGGATTGAGAACCAAAAATGAA
TAAATAAGATCTAAACTATAACATTTGTTGTTGTTTTTG
