Microarray Probes on PGSC0003DMT400094545

Probe IDChipProbe Sequence
CUST_991_PI426222305 JHI_St_60k_v1 ATGAAGTGGGGGAATCTGATAGAGCAAGCAAGTTCTGCTGGTTCAGACACTACTCTCATT

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400094545

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Source Transcript PGSC0003DMT400094545 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG) Solyc02g089720.1 +1 0.0 843 419/434 (97%) evidence_code:10F0H1E0IEG genomic_reference:SL2.50ch02 gene_region:46036643-46038802 transcript_region:SL2.50ch02:46036643..46038802+ go_terms:GO:0016798 functional_description:Endo-beta-1 3-glucanase (AHRD V1 ***- B5THH0_PNECA); contains Interpro domain(s) IPR005200 Glycoside hydrolase, family 81
TAIR PP10 AT5G15870.1 +1 0.0 643 314/448 (70%) glycosyl hydrolase family 81 protein | chr5:5182641-5184878 REVERSE LENGTH=745

Transcript Sequence (1302 bp)

>PGSC0003DMT400094545 1302 pgsc_dm_v3.4
ATGCTGGCTCATCCCCTCCATCTTCAGCTCCTTTCTGCTGTGGATAGCTCGGTAACTGTC
TTGGAGGGATTTAAGTACAATAGTATTGATGGTGAGCTTGTTGGTGTTGTTGGAGACTCA
TGGATATTGAAGAGTGACCCTGTTTCTGTAACATGGCATTCCATTAAAGGTGTTAAGGAG
GAGGCATGTTTAGAAATAATTGATTCGTTGAATAAGGATGTTGCTGCCTTGGATTCAAAG
GGAGTATCTACAACATCATCTTATTTTTTTGGAAAATTGATTGCAAGAGCAGCAAGGCTG
GCATTGATAGCTGAAGAGGTTTGTCACCTTGATGTTATCCCGGCAATCCGCAAATTCTTG
AAGGATACAGTTGAACCATGGTTGGAGGGGACTTTTCAAGAAAATGGTTTCTTTTATGAA
TCAAAATGGGGTGGAATTGTGACTAAGCAAGGGGCGTTGGATTCGGGAGCTGACTTTGGT
TTTGGGGTCTATAATGATCACCATTTTCATATTGGTCATTTCCTTTATGCAATTGCAGTG
CTAGCCAAGATAGATCCCATCTGGGGGAGGAAGTATAAGCCACAAGCTTATGCACTTATG
GCGGATTTTATGAATTTAAGCAGGCGATCAAATTCAAAGTATGCCCGGTTGAGGTGTTTT
GACTTGTGGAAGCTGCACTCTTGGGCTGGAGGATTGACAGAGTTTGCTGATGGACGAAAC
CAGGAGAGCACAAGTGAAGCAGTTAATGCATACTATTCAGCAGCTTTAATGGGTTTGGCC
TATGGGGATACCCATCTTGTTGCCATTGGATCGACCCTTTCAGCTTTAGAGATTCATTCT
GCACAGACTTGGTGGCATGTGAAAGAGGGAAGCACTTTATATGGGGAAGAATTCACAAAA
AACAACAGGGTGGTGGGTGTTTTATGGTCTAACAAAAGGGATAGCGGCCTTTGGTTTGCT
CCACCTGAATGGAAAGAGTGTAGACTTGGAATTCAGGTCTTACCAATATTGCCCATTACT
GAACTTCTGTTTTCAGACGTGCAGTTTGTGAAGCAGTTGGTCGAATGGACACTGCCAGCT
CTGGCAAGGGAAGGGGTTGGGGAAGGGTGGAAAGGGTTTGTGTATACTTTGGAAGCAATA
TATGATAAAGTGGGTGCTCTAAACAAAACTAGGAGCTTAACTGGGTTTGATGATGGAAAT
TCTCTTTCAAATCTTCTATGGTGGATTCATTCTAGAGATGATGAAGTGGGGGAATCTGAT
AGAGCAAGCAAGTTCTGCTGGTTCAGACACTACTCTCATTGA