Microarray Probes on PGSC0003DMT400080788
Probe ID | Chip | Probe Sequence |
---|
CUST_4017_PI426222305 |
JHI_St_60k_v1 |
AAGTTTTATTCAAGGGCATCAAGCTTTAGTAGGGAAACGCAAGTGCCATGTTCTATCTAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400080788
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400080788 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT3G13600.1 |
+1 |
0.0 |
598 |
338/594 (57%) |
calmodulin-binding family protein | chr3:4445102-4447383 FORWARD LENGTH=605 |
Transcript Sequence (1638 bp)
>PGSC0003DMT400080788 1638 pgsc_dm_v3.4
ATGGGGATATCGTTTTCGTGTCCACTTGCTTCTCATACTGATTTGGAAAACAGTCTTGAA
TCTGTTATTGTGAAGTCTATCAACTTTGGTGATAATGAGCACAAGACGCCATTACGATCT
ATTAGTTTCAAAATCCAAGATTCTGAACCTATAGTAATGCAATCAGATGGTTCAGGAAAT
ATGCTCATAGAAAAATCTGTCATCTCAAGGACAAAGGAAAATGTAGTTGCCTATCCATCT
TCAGATAACATGATGAATCAACAAAGTACGAAATCGCCTTTGTTGGATAGTAGCAGCAGC
CCGAAACATGAGGCAGCTGTAAAGTTGCAGAAAGTATACAAGAGCTTTCGAACAAGACGA
AAATTAGCAGATTGTGCTGTACTCATTGAGCAGAGTTGGTGGAAACTATTAGATTTTGCA
GAACTCAAACATAGTTCTATTTCATTTTTTGATCTTGAGAAGCACGAAACAGCAATTTCG
CGCTGGTCAAGAGCGAGAACTAGAGCTGCCAAGATCGATCCACGACATCGTTATGGACAC
AACTTGCATTTCTATTATGTTCAATGGTTGCATTCTCAAAATAAAGAGCCATTCTTCTAC
TGGTTGGATATTGGAGAAGGAAAAGAAGTTAATCTTGTTGACAAATGTCCGCGATGGAAA
CTTCAGCAACAATGCATCAAGTACCTTGGTCCTATGGAAAGAAAGGCTTATGAGGTCATA
GTGGACGACGGGAATCTCTTCTACAAAGAGACTGGGAAGCTCCTTGACACCACTGGTGAA
CCAAAAGGAGCTAAATGGATATTTGTCCTCAGCACATCGAAAACCTTATATGTTGGGAAG
AAAAAGAAAGGAACATTTCAGCATTCCAGTTTCTTGGCTGGGGGCGCGACTTTAGCTGCT
GGCAGGATAGTTGTGGAACAAGGAGTTTTGAAGGCTGTCTGGCCTCACAGTGGACATTAT
CGACCTACTCCAGAAAACTTTCAAGACTTCATTTCGTTTCTTAGGGAGAACGATGTGGAC
TTAAGCGATGTTAAGCTTGATTCTATCGACGAAGAAGATTTTATTGGGAAGAAGAGTGGT
GTTTACCTTAGAGGTAATGCTTCGGATGATGACATAGGTCAAAAAGATGGTCTGGAGACA
GGAGAGAACGATTTAGAAGACGTAACGACTTCAGATACAAATGAGTTGAAAGAACAAGCA
ACTTTTGCTGCTTCATCTCATAGCTTCAATGACAAACTAGCTAATCTACGAATTCCTAGC
AACGATGATTTACTAGAGAGATTGACGAATGAAAGTGTAGCTGTTGAATCCATTTCGCCA
ACAGATGGATATGAATCAGCAGAAGATTCAATTGCTTTTGAACAAGAAAGTAAAGGAGAT
ACAATTCCACAAGAATCTATACTGAAGAGGATAAATTCACACAAGGGAATGAAGTCATTT
CAATTAGGGAAACAATTGTCTTGTAAATGGAGTACTGGAGCTGGACCTCGAATCGGATGC
TTGAGAGATTACCCTCCGCAACTGCAATCACATGCATTAGAAGAAGCTAACTTGTCCCCG
AGGAGTGCTTGTCGTCTCAAGTTTTATTCAAGGGCATCAAGCTTTAGTAGGGAAACGCAA
GTGCCATGTTCTATCTAA