Microarray Probes on PGSC0003DMT400079707
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_45552_PI426222305 |
JHI_St_60k_v1 |
CCCTCTCTGCGTCATCTTTGAATTTCACGTGCAATAATATTTGAAATCTACACCTATTAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400079707
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400079707 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G17330.1 |
+3 |
0.0 |
557 |
288/333 (86%) |
glutamate decarboxylase | chr5:5711141-5714839 FORWARD LENGTH=502 |
Transcript Sequence (2490 bp)
>PGSC0003DMT400079707 2490 pgsc_dm_v3.4
CAAATCCAACACGTCAGTTGTGGGTAGAGAATATTAAAAGCAACAGGTAGGGAAGCTTTC
CATTTCCCAACCGCCACATCGCACTACGTGTCACTCCCACATTTATCCCTCTCCTCTGTC
ACTCTTATTTCTCCGATCAATCACCACTCTACTTTTCCCCAATTCCGAAACAAAAAGGTT
GTAGAAATCAGTGAGGTTACAAAAAAATGGTGTTAACAACGACTTCCATAAGAGAGTCAG
AAGAGAGCTTGCACTGTACATTTGCATCAAGATATGTACAGGAACCTTTACCTAAGTTCA
AAATCCCTAAAAAATCCATGCCGAAGGAAGCAGCTTTTCAGATTGTAAACGACGAACTTA
TGTTGGATGGTAACCCGAGGTTGAATCTAGCTTCCTTTGTTAGCACATGGATGGAGCCGG
AGTGCGATAAGCTCATCATGGCATCCATTAATAAGAACTATGTCGACATGGATGAGTACC
CTGTCACCACTGAACTTCAAAATAGGTGCGTTAACATGTTAGCACATCTTTTCCATGCGC
CAGTTGGTGATGATGAGACTGCAGTAGGAGTTGGTACAGTGGGTTCATCAGAGGCAATCA
TGCTTGCTGGTCTTGCTTTCAAACGCAAATGGCAAGCGAAAAGAAAAGCAGAAGGCAAAC
CTTTTGATAAGCCTAATATAGTCACTGGAGCTAATGTGCAGGTCTGCTGGGAAAAATTTG
CAAGGTACTTTGAGGTTGAATTGAAGGAGGTGAAACTAAAAGAAGGATACTATGTAATGG
ACCCTGCCAAAGCAGTAGAGATGGTGGATGAGAATACAATATGTGTTGCCGCAATCCTTG
GTTCTACTCTGACTGGGGAATTTGAGGATGTGAAGCTCCTAAACGAGCTCCTTACGAAAA
AGAACAAGGAAACTGGATGGGATACACCGATCCATGTCGATGCTGCGAGTGGAGGATTTA
TTGCTCCTTTCCTGTGGCCAGATCTCGAATGGGATTTCCGTTTGCCTCTAGTGAAAAGTA
TAAATGTCAGTGGTCACAAGTATGGCCTTGTATATGCTGGTGTCGGTTGGGTGATATGGC
GGAGCAAGGAAGACTTGCCCGATGAACTCGTCTTTCATATAAATTACCTTGGCTCTGATC
AGCCTACTTTTACCCTCAACTTCTCTAAAGGTTCCTATCAAATAATTGCGCAGTATTATC
AGTTAATAAGGCTTGGCTTTGAGGTAATTACCGAAATCACATTAAACACGACTCTGTGTT
TCTTCAAGTCTGAACAACAATTGCCTGGATTATATTATTTAATATAAGTCGACAGCTGCC
TCTTGCAGATAGATTGCGTACAATAGACCCTTGTGGTCCGGCCTTGCGGGAGCTTTAGTA
AACTGGGCTGTCCCTTATTTCTACACTGCCCTTTTTTCTATTATATTAGTTGTTAATATA
AGTCGAAAGCTGAGTCTCTTAAGGGGTATTTTTAGATCTTATATTGTGCTTGCTTTGATT
ATGCAGAACACCTTTGAATTTAGAACACATTTTACTCATAAAGAGTCATGGAGTAAAACA
GTGGAATATTTAGATGATGTTTGTCAACAGCTATGTTCCTTCTGAATTCTGAGGTGGTTG
ATAATTCATTTTGTGCAACAAAGTAAACCTGCCATTAATCGTATTGCTTAAGCACGATAC
AAATGATTTACACTTTTGCTTCTGGTCTGCAAGGGTTATAAGGACGTCATGGAGAATTGC
TTAGCAAATACAAAAGTACTAACAGAGGGAATCACAAAAATGGGGCGGTTCGATATTGTC
TCTAAGGATGTGGGTGTTCCTGTTGTAGCATTTTCTCTCAGGGACAGTAGCAAATATACA
GTATTTGAAGTGTCCGAGCATCTCAGAAGATTTGGATGGATTGTCCCAGCATACACAATG
CCACCGGATGCTGAACACATTGCTGTTCTGCGGGTTGTCATTAGAGAGGATTTCAGCCAC
AGCCTAGCTGAGAGACTTGTTTCCGACATTGAGAAAATTCTGACAGAGTTGGACACACAG
CCTTCTCGTTTGCCCACCAAAGCTGTTCGCGTCACTGCAGAGGAAGTGCGTAATGACAAG
GGTGATGGGCTTCATCAGTTTCACATGGATACTGTAGAGACTCAGAAAGACATAATCAAG
CATTGGAGGAAGATCGCAGGGAAGAAGACCAGCGGAGTCTGCTAGGTCTAGCCACACTTG
TTTTCTGGGCTCCGCTTCCATCGTCATCCTGTAGTATGTATTACGTGTGTTGTTTCCATC
TAATGTAGTAGTTGGTACCGTAATCTGTAAATGCTTTCATGATCTTGGCTCTGTATATGT
TAATAAGCACTGCATTTCAAGTTCCTGTAAGTATTTATGTATGAATCTATCCGTCTGCCA
TAATTGGTAGAATGCCCTCTCTGCGTCATCTTTGAATTTCACGTGCAATAATATTTGAAA
TCTACACCTATTATAAATGATGTTTTTTTC
