Microarray Probes on PGSC0003DMT400066508
Probe ID | Chip | Probe Sequence |
---|
CUST_14751_PI426222305 |
JHI_St_60k_v1 |
CTCCGTCATAGGAAATTCTGATGCAACGGAATTGCGTTAAAAAACTGCTAATGATGAAGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400066508
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400066508 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT3G19615.1 |
+2 |
3e-14 |
66 |
34/63 (54%) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 10 Blast hits to 10 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:6815073-6815354 REVERSE LENGTH=93 |
Transcript Sequence (570 bp)
>PGSC0003DMT400066508 570 pgsc_dm_v3.4
GCCATCTCCATTTTCTATCATCAAAACTTAGACACCCAAAACTCAAAAACATCATCCATA
CATAACTCACTAAGACGAAAAAAGAAAACTCATGGAAGGTTTAATCCCATTTCTCCTTCA
CGCTATGAAGAAACAGAGGCCTCACCACACTAGTTTCCGGTCCCTTTCCGACACCTCTAA
CCGGAGCTACCACTTGCTCGTCGGGGCTGATTCCATCGAGGGCTCGTCTCACCGGAGAAC
TCGATCGGAGTTTCAGCCTCCGGTCACCACTGTTGATTTCTTGGATCTGCCTCAGCCTAG
AAGCTTCAATAACAGAGCATCTTCTCTGCTTTCCCCTGTTTCCAACCAGAATGCTTCCAG
ATTGCAATTTGGTTCTAACATGGCTGCTACAAACAATTTACAAGGGACGATTTCTGTTGA
TAATCTCCGTCATAGGAAATTCTGATGCAACGGAATTGCGTTAAAAAACTGCTAATGATG
AAGAATTTGTAAATGTACTATATTGGTTTCGTTCTTTTGTACTAATATTGTTGTTTGACT
ATTATAAAATGGTGTTCTTTTATGTTATCA