Microarray Probes on PGSC0003DMT400063589
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_12573_PI426222305 |
JHI_St_60k_v1 |
AAGGTCCAAGTTCGTCATGTATTCTGCTTTGTATTACGAGTTTCCCTTCTAATGTTATTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400063589
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400063589 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G56220.3 |
+1 |
1e-28 |
108 |
58/92 (63%) |
Dormancy/auxin associated family protein | chr1:21043414-21044469 FORWARD LENGTH=140 |
Transcript Sequence (841 bp)
>PGSC0003DMT400063589 841 pgsc_dm_v3.4
ATCAGTCCCCATAGCATCACTCACTCCCTATAGAACACAACAAGCCGAGAAAGTTCAATC
CCAGCGGACGCAGAATTTCCTTTTTATTCTTCTCTTCTTCTCCCCTTAACGTGTGCCGAT
TGGCTAACCTGCACCATGAGCTTACTTGACAAGCTCTGGGACGACACCGTTGCCGGTCCC
CTGCCAGATAGTGGCCTCGGGAAACTCCGGAAGTATTCGACTTTTAGTCCGCGTTCAAAT
TCCGGCAAGGAATCAGAAGTTTCAACACCGAGATCCTTCACTGAGGAAGCAAGTGAGGAC
GCGGTGAAGGTGACTAGAAGTATCATGATAGTAAAGCCTTCCGGGAGTCAGAATAGAGAT
TCACCTCCCGTTTCTCCGGCCGGTACTACTCCTCCGGTATCTCCTTTTGCCGGTTCCGCT
GGAAGAGAAGCATTTCGGTTCCGGCGGCGATCAGTATCATTTGCTTACGAGAATGCCAGT
GGGGTTGGACCCAGAAGCCCTCGTCCTCCTTACGACCTGTGAGATGTAGTCGGGTTCTCT
TTTTTTGTTATCCCTCTTGAGGCGGCTGAATGTAGTATAGCTAGTCGACATACTCAACAT
GTTCCTGGTTGAGAATGTTGTTTTGTGTGGACTTGTGGCAGGTGGTGTTTTGTTTGCTTA
ATTTTGTAAATAGTGCAAGTGGTTCTTCATCTTGCAGATGTTGTGACGAAGGTTTAGCAC
AAAGATGTAAGGTCCAAGTTCGTCATGTATTCTGCTTTGTATTACGAGTTTCCCTTCTAA
TGTTATTTTGGTTTTCTTATCTCCGAAATGTTTTTTTTTTTGGTTTCCACCAGATGTGTT
G
